Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 373 a.a., extracellular solute-binding protein from Dickeya dianthicola ME23

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 19/279 (6%)

Query: 26  LTVYTALEAEQLKT-YKQAFEKANPDIEIKWVRDSTGIITAKLLAEKERPQA--DAVWGL 82
           +TVY   + +  +T +KQAFE   P I++  + D +    A++  +        D V   
Sbjct: 51  VTVYAGGDVQSQQTGFKQAFENRFPGIKLNVIVDYSKYHDARIDNQLATDTLIPDVVQLQ 110

Query: 83  AASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVGMDVWAATICFNTIEAEKQGL 142
                    + G+L  Y P    K+   +RDA    AW+G  V A +   NT   +++  
Sbjct: 111 TVQDFPRWKKQGVLLNYKPVGWDKVYPEFRDADG--AWIGAYVIAFSNLVNTQLLDEK-- 166

Query: 143 SKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGWAYMDALHQNIGQYV 202
           S P    D  +P+ KG +++  P         V  W +   +  GW +++ L +    YV
Sbjct: 167 SWPREANDYLRPDLKGNLILAYPNDDDA----VLFWYKLVVDKYGWEFVEKLQEQDPVYV 222

Query: 203 HSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLPKEG--LGWEIEATAVIKGSP 260
              + P    A G++    +F          G+    VLPK    + W  +  A+ K + 
Sbjct: 223 RGTNVPGAQIATGKY--SATFTSSGALAPAAGSVTRFVLPKADPFVSW-AQRAAIFKQAK 279

Query: 261 KADVAKRLADFSASPAAMELYKENFAV---LAAPGIAKP 296
             + AK    +   P         ++V   +A P   KP
Sbjct: 280 HPESAKLYLSWLLDPQTQTQVSRMWSVRTDVAPPAGYKP 318