Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 349 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  419 bits (1078), Expect = e-122
 Identities = 205/335 (61%), Positives = 247/335 (73%), Gaps = 4/335 (1%)

Query: 6   ALAVAVSAVFSL---QASAADTQLTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTGI 62
           ALA+  +  F+     A+ A T+LTVYTALE EQL  YK+AFE  NP IEI+WVRDSTG+
Sbjct: 12  ALALLTTVAFATGAATAAGAATRLTVYTALENEQLTPYKKAFEADNPGIEIEWVRDSTGV 71

Query: 63  ITAKLLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVG 122
           +TAKLLAEK+ P+AD VWGLAASSL ILD  GML  Y PK    +  ++RDA  PPAWVG
Sbjct: 72  VTAKLLAEKDNPKADVVWGLAASSLMILDAQGMLMPYQPKGAEDLKSSFRDAKTPPAWVG 131

Query: 123 MDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTF 182
           MD W A ICFNT+EAEK+ L KP SW DL KPEYKG+IVMPNPASSGTGFL VS WLQT 
Sbjct: 132 MDAWMAAICFNTVEAEKKKLPKPTSWADLLKPEYKGQIVMPNPASSGTGFLAVSGWLQTM 191

Query: 183 GEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLP 242
           G  +GW+YMD L+ N+  Y HSGSKPCK+AAAGE+PIGIS EY   Q K +GAP+D++L 
Sbjct: 192 GADRGWSYMDGLNDNVALYTHSGSKPCKMAAAGEYPIGISIEYTGAQQKTKGAPIDVILA 251

Query: 243 KEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPA 302
            EG+GWE+EATA++KG+ KA+ AK LAD++AS  A E Y   + V A PG+ K     P 
Sbjct: 252 SEGVGWEMEATAIVKGTQKAEAAKALADWAASRKANEQYVNFYQVTAHPGVTKETPNYPK 311

Query: 303 DYEQRLIK-NDFVWASKNRDQILAEWRKRYDGKSE 336
           + E  + K NDFVWA+ NRD+ILA+W KRY  KSE
Sbjct: 312 NAEAAMNKANDFVWAAANRDRILADWEKRYGAKSE 346