Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 366 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 50.4 bits (119), Expect = 7e-11
 Identities = 76/314 (24%), Positives = 125/314 (39%), Gaps = 23/314 (7%)

Query: 6   ALAVAVSAVFSLQASAADTQLTVYTA---LEAEQLKTYKQAFEKANPDIEIKWVRDSTGI 62
           AL   ++A  S  A A  +Q+TV            K +   FEKA     +   R++   
Sbjct: 30  ALPPVLAAGMSGPALAQTSQITVADPGGPYSPAFRKAFYDPFEKATGIKVVNVAREAEPT 89

Query: 63  ITAKLLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKIS--GNYRDAANPPAW 120
              K + E      D V  L  S+  IL +  +LE   P D       G   DA     W
Sbjct: 90  AQFKAIVETRSYSWD-VCTLTLSARDILTRQNLLE---PLDFAAADAPGLMPDALTGQ-W 144

Query: 121 VGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPE-YKGK-IVMPNPASSGTGFLDVSAW 178
           +G DV++  + + T   +K   + P SW D    E + G+  +  NP  +    L     
Sbjct: 145 MGTDVYSTILGYRT---DKFASNPPQSWADFWNVEKFPGRRSLRKNPIDTLEQALLADGV 201

Query: 179 ----LQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQG 234
               L      + +  +D +  +I  +   G++  +L  +GE  +   +   A      G
Sbjct: 202 PLDKLYPLDVERAYKSLDRIRPHIAAWWTGGAQSTQLIQSGEVDMIALWNARAQAAIDGG 261

Query: 235 APLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPGIA 294
           AP+ I    +GL + IE   + +G+P+AD A++   F A P    ++ E  A    P   
Sbjct: 262 APVKISW-NQGL-YSIEGWGIPRGNPRADAARKFIKFCADPQRQAIFTEVLAY--GPTNL 317

Query: 295 KPQTELPADYEQRL 308
           K   ++P +  Q L
Sbjct: 318 KAYDDIPKERAQAL 331