Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 341 a.a., ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  143 bits (361), Expect = 6e-39
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 9/330 (2%)

Query: 6   ALAVAVSAVFSLQASAADTQLTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTGIITA 65
           +L +A + +  + A AA   L +  A +    +  K  FEK + DI++  VR S+G   A
Sbjct: 8   SLLLAGTTLLGVPAHAAG-DLNLICAADVVICEQMKGDFEKTH-DIKVNMVRMSSGEAYA 65

Query: 66  KLLAEKERPQADAVW-GLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVGMD 124
           K+ AE   P+ D  W G     L    +N  LE Y  K L ++    ++ A    +  + 
Sbjct: 66  KIRAEARNPKTDLWWAGTGDPHLQAASENLTLE-YKSKMLDQLQDWAKNQAESAGYKTVG 124

Query: 125 VWAATIC--FNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTF 182
           V+A  +   +NT   +K+G  +P  W DL  PE KG+I + NP SSGT +  +++ +Q  
Sbjct: 125 VYAGALGWGYNTDIFKKKGYKEPKCWADLLAPELKGEIQIANPNSSGTAYTALASLVQIM 184

Query: 183 GEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLP 242
           GE Q + Y+  L+ NI QY  SGS P K AA GE  +GI F + AV    +G P+  V P
Sbjct: 185 GEDQAFDYLKKLNGNISQYTKSGSAPVKAAARGETAVGIVFMHDAVAQTAEGFPVKSVAP 244

Query: 243 KEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAV-LAAPGIAKPQTELP 301
            EG G+EI + +++KG+   + AK   D++  P      K+  +  L +   A+   E P
Sbjct: 245 CEGTGYEIGSMSIVKGARNLENAKTWYDWALQPDVQSRMKDAKSFQLPSNKTAEIPKEAP 304

Query: 302 ADYEQRLIKNDF--VWASKNRDQILAEWRK 329
              + +LI  DF      + R  +L  W K
Sbjct: 305 RFEDIKLINYDFKTYGDPEKRKALLERWDK 334