Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 330 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score =  117 bits (292), Expect = 5e-31
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 25/329 (7%)

Query: 7   LAVAVSAVFSLQASAADTQLTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTGIITAK 66
           L    + + S   + A+  + VY+A   + +      FEK     +++ V+  +G +  +
Sbjct: 11  LVAGATFLASAAFAHAEGTVVVYSAAPQQLMDELLPLFEKKT-GTKVELVKAGSGELMNR 69

Query: 67  LLAEKERPQADAVWGLAASSLAILDQNG-MLEAYAPKDLGKISGNYRDAANPPAWVGMDV 125
           + AE  +   D +W +  +   ++D +  + E Y P +   I+  +  + N   WV    
Sbjct: 70  IKAETGKAAGDVIWSVDGT---VIDFSADLFEPYKPVEAASINPAFSPSTN---WVPFT- 122

Query: 126 WAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTF-GE 184
            A    F   +   +G   P SW DL KPEYKG I       SG+ ++ ++  LQ F  E
Sbjct: 123 -AVVTAFIVNKEALKGAPVPTSWADLAKPEYKGLISSARADQSGSAYIQMATVLQDFDSE 181

Query: 185 PQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDIVLPKE 244
            +GW     +  N      SG+ P +    GE  +GI+ E  A++ K   AP++IV PKE
Sbjct: 182 EKGWEIYTGILGNSVLSTSSGAVP-RFVNDGEQAVGITLEDAALRYKLGSAPVEIVYPKE 240

Query: 245 GLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPADY 304
           G     +  A++KG P ++  K   DF  S  A E       V+   G    +T++PA+ 
Sbjct: 241 GTAIAPDGMALVKGGPNSENGKAFIDFIVSKEAQE-------VVVKAGRRSVRTDVPANV 293

Query: 305 ------EQRLIKNDFVWASKNRDQILAEW 327
                 +    K DF WA+ NR +++ +W
Sbjct: 294 ALVPLSDVPDAKYDFKWAADNRSRLMEKW 322