Pairwise Alignments

Query, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 359 a.a., ABC transporter, substrate binding protein (iron) from Agrobacterium fabrum C58

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 71/306 (23%), Positives = 120/306 (39%), Gaps = 26/306 (8%)

Query: 8   AVAVSAVFSLQASAADTQ-LTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTGIITAK 66
           A+A  AVF   +   D Q L VY++L+        + F+KANPDI + +    TG I  +
Sbjct: 21  ALAQVAVFPALSGKTDAQTLVVYSSLDEPLATPMIEGFQKANPDIAVHYEDMLTGEIYDR 80

Query: 67  LLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPAWVGMDVW 126
           ++ E +  +  A    A SS   L      + YA +    +S  +      PAW      
Sbjct: 81  IVKETDAGKKTA--DFAFSSAMDLQVKLSNDGYAQRSDLAMSARW------PAWANWRNT 132

Query: 127 AATICFN-----------TIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDV 175
           A  + F            T E      ++ V + +    E  G+I   +   SG GFL +
Sbjct: 133 AYALTFEPAVFVYHKPSFTTEKPPATRAEFVDYLERHAKEVHGRIATYDIERSGVGFLFM 192

Query: 176 SAWLQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISF--EYPAVQLKRQ 233
           S   + FG+   W+ + A+     +   + S   +  + G F +G +    Y A    R 
Sbjct: 193 SRDQEQFGDI--WSVIKAMGAAGVKVYSTSSAILERVSDGRFVLGYNILGSYAADWASRH 250

Query: 234 GAPLDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLA-APG 292
              + IVLPK+          V + +   ++ +R  +F  S     +      + A +P 
Sbjct: 251 -PDVGIVLPKDYTVVMSRIGLVPEAAANPELGRRYLEFFMSKEGQTIMARQLQIPAVSPE 309

Query: 293 IAKPQT 298
           +A   T
Sbjct: 310 VAGENT 315