Pairwise Alignments

Query, 398 a.a., ribosomal RNA large subunit methyltransferase I from Pseudomonas putida KT2440

Subject, 396 a.a., predicted methyltransferase (RefSeq) from Escherichia coli BW25113

 Score =  212 bits (539), Expect = 2e-59
 Identities = 139/396 (35%), Positives = 210/396 (53%), Gaps = 10/396 (2%)

Query: 6   LRLKANADRRLRAGHLWVYSNEVDVSATPLQGFQA-GQQAILEAANGKPLGIVALSPNNL 64
           L L    ++ L   H WV+S  V      ++G  + G+   +    GK L   A SP + 
Sbjct: 5   LVLAKGREKSLLRRHPWVFSGAV----ARMEGKASLGETIDIVDHQGKWLARGAYSPASQ 60

Query: 65  ICARLLSRDIKLPLDKSLLVHRLNVALSLRERLFEQP---CYRLVYGDSDLLPGLVVDRF 121
           I AR+ + D    +D +    RL  A   R+ L ++     YRL+ G+SD LPG+ +DRF
Sbjct: 61  IRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF 120

Query: 122 FDILVVQLASATMEAHKDDVIAALVQVLKPSGILFKNDSAARDAEGLQRYVETVYGEVPD 181
            + LV+QL SA  E  +  +I+AL  +     I  ++D A R  EG++     V GE+P 
Sbjct: 121 GNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPP 180

Query: 182 -WVPLEENGVKFEAPVREGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQAGA 240
             +P+EE+G+K    ++ G KTG++ D R +R     YV+ KRVL+ FSY GG+ V A  
Sbjct: 181 ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM 240

Query: 241 FGASEVFCVDASGFALDGVERNAALNGIS-EKLTCIEGDVFEALRELKAAEERFDVIIAD 299
            G S+V  VD S  ALD   +N  LN +   K   +  DVF+ LR  +   E+FDVI+ D
Sbjct: 241 GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300

Query: 300 PPAFIKRKKDLKNGEAAYRRLNEQAMRMLNKDGILVSASCSMHLPEDDLNNILLTSARHL 359
           PP F++ K  L      Y+ +N  A+++LN+ GIL++ SCS  +  D    I+  +A   
Sbjct: 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA 360

Query: 360 DRNMQLLERGGQGPDHPVHPAIAETRYIKSITCRLL 395
            R++Q +E+  Q  DHPV     E  Y+K   CR++
Sbjct: 361 GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM 396