Pairwise Alignments

Query, 494 a.a., Signal Recognition Particle protein translocation receptor GTPase from Pseudomonas putida KT2440

Subject, 453 a.a., Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  166 bits (421), Expect = 1e-45
 Identities = 99/278 (35%), Positives = 150/278 (53%), Gaps = 12/278 (4%)

Query: 222 DLLDEIETRLLTADVGVEATSAIVQNLTQKVA----RKQLADADALYKSLQEELAALLRP 277
           + L E+   LL ADV +      +  + +K       K L       K ++ EL A +  
Sbjct: 29  ETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGE 88

Query: 278 VEQPLNVQAQNKPYVILVVGVNGAGKTTTIGKLAKKL-QLEGKKVMLAAGDTFRAAAVEQ 336
             Q LN+ AQ  P V+L+ G+ GAGKTT++GKL K L +   KKV++ + D +R AA++Q
Sbjct: 89  ENQTLNLAAQ-PPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQ 147

Query: 337 LQVWGERNQIPVIAQHTGADSASVIFDAVQAAKARGVDVLIADTAGRLHTKDNLMEELKK 396
           L+   E+  +       G     ++  A++ AK +  DVL+ DTAGRLH  + +M+E+K+
Sbjct: 148 LETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQ 207

Query: 397 VRRVIGKLDVEAPHEVLLVLDAGTGQNAISQAKYFNQSVELTGLALTKLDGTAKGGVIFA 456
           V   I       P E L V+DA TGQ+A + AK FN+++ LTG+ LTK+DG A+GG   +
Sbjct: 208 VHASI------KPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALS 261

Query: 457 LAKQFNIPIRFIGVGEGIDDLRTFEAEPFVKALFAERD 494
           +      PI+F+GVGE  D L  F  +     +    D
Sbjct: 262 IRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGD 299