Pairwise Alignments

Query, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

Subject, 764 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  185 bits (470), Expect = 7e-51
 Identities = 108/309 (34%), Positives = 171/309 (55%), Gaps = 5/309 (1%)

Query: 8   FWWSSVAVICALVLGVSGAFLYLSPSLPSVESLRSIQLQIPLRVYSSDGKLIAEFGEMRR 67
           F+W  V  I   + GV+G  LY    +PS  S    +    +++ S +G ++A  G    
Sbjct: 75  FYWCIVLGIWGGI-GVAGLVLYYGARMPSASSWSIPERPPNVKIVSVNGSVLANRGTTGG 133

Query: 68  SPIRFAEIPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVA 127
             +   ++ P   QA+++ ED  F +H+GVDP  L RA    V TG    GGST+T Q+A
Sbjct: 134 EALALEDMSPYIPQAVMAIEDRRFYSHFGVDPLGLGRAIVTNVLTGRAVQGGSTLTQQLA 193

Query: 128 KNFFLTSERSFSRKTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAAAQVYYGK 187
           KN FL+ +R+  RK  E+LL+  +E E TKD+IL +Y+N++Y G+ AYG++AA++ Y+ K
Sbjct: 194 KNLFLSPDRTLERKVQEVLLSFWLEHEFTKDQILAMYLNRVYFGSNAYGVEAASRRYFNK 253

Query: 188 SIRDVSLAQMAMIAGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQASYEAALAE 247
           S RDV+L + AM+AGL KAPSR +P  +P  A+ER   +L  M  +G I     + A+++
Sbjct: 254 SARDVNLGEAAMLAGLLKAPSRLSPARDPQAAEERAQVVLQSMRDVGFITDDEIKTAMSQ 313

Query: 248 PLNASYHVPTPEVNAPYIAEMARAEMVGRYGSDAYTEGFRVTTTVPSDMQEMANKAVLKG 307
           P   +    +   +  Y A+M   E+ G  G     +   V TT+  +++  A KA+   
Sbjct: 314 PPTKAKRFWSGAEH--YAADMVLEEVRGLVGE--VKQDIVVDTTIDPNLERDAEKALTHV 369

Query: 308 LSDYDERHG 316
           L    ++ G
Sbjct: 370 LQGDGKKQG 378



 Score =  174 bits (441), Expect = 2e-47
 Identities = 124/385 (32%), Positives = 185/385 (48%), Gaps = 73/385 (18%)

Query: 422 AQSALVTLDPNNGAIRALVGGFSFEQSNYNRAVQAKRQPGSSFKPFIYSAALDSGYTASS 481
           +Q+ALV++D   GAIRA+VGG  + QS +NRAV+AKRQPGS+FKPF+Y AAL+SG T  +
Sbjct: 380 SQAALVSID-GTGAIRAVVGGADYAQSQFNRAVKAKRQPGSAFKPFVYVAALESGLTPYT 438

Query: 482 LVNDAPIVFVDESVDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTIDY 541
           + ND P+   +      W P+N    + G + +  AL  S N ++ +L+  +G +R    
Sbjct: 439 IRNDGPVRIGN------WTPENYEKKYRGEVTLATALANSLNTIAAQLVMEVGPERVTQV 492

Query: 542 IAKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYLIERIESRSGETLF 601
             + G  + +L  N S+ALGT+ ++ ME+   ++ F NGGYK TP++++RI    G+ L+
Sbjct: 493 AHRMGI-ESELQNNASIALGTSEVSLMELTASYAPFMNGGYKATPHIVKRITDADGKVLY 551

Query: 602 T---ANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAFSQVAAASQAPAVAEQIIDGR 658
                NP RV                              S+  AA+             
Sbjct: 552 ENKYDNPPRV-----------------------------LSEEIAAT------------- 569

Query: 659 TTYILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVWVGFD 718
               +  ML  VI  GTG+ A   G    AGK+GTT   +DA F GY ++  T VW G D
Sbjct: 570 ----MNGMLSRVITEGTGKAARLQG-WQAAGKSGTTQSFRDALFVGYTSNLTTGVWFGND 624

Query: 719 QPETLGRREYGGTAALPIWMNFMGAALKDKPAHAPAEPEGILSLRVDPVSGRAASPSTPN 778
              ++ ++  GG      W +FM A      AH+   P         P+ G  A    P 
Sbjct: 625 DGTSM-KKVTGGGLPARAWKDFMTA------AHSGLSP--------SPLFGLGAGGVPPL 669

Query: 779 AYFELFKAEDSPPSVDELGNGAAPG 803
              +    E +P S+ E+ + A  G
Sbjct: 670 GDMQQPAPEAAPSSIGEIISNALGG 694