Pairwise Alignments

Query, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

Subject, 405 a.a., secretin from Pseudomonas simiae WCS417

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 16/239 (6%)

Query: 180 QVAIEARIVEANVDYEKSLGVRWGGP----LYGEK--LRPGKELFVDLGLERAGSSIGLG 233
           QV  + R VE +    K    R  G      +G    L P + +F  L +   G ++G G
Sbjct: 133 QVQTDIRFVEVSRTKLKEASTRLLGSGANFFFGSPNLLSPSEGVF-KLPVSTDGFNVGFG 191

Query: 234 LLRGDVLLDLELSAMEKSGNGEIISQPKVVTADKETARILKGTEVPYQETSQSGAT-SVS 292
             R   +++    A+E+SG    +++P +V    ++A  L G EVP    S    T S+ 
Sbjct: 192 GGRVKAMIN----ALERSGFAYTLARPSLVAMSGQSASFLAGGEVPIPVPSAGSDTISIE 247

Query: 293 FREASLSLEVTPQITPDNKVIMTVRVTKDEPDYVNALN----NVPPIRKNEVNAKVRVAD 348
           ++E  + L +TP +   +++ + V     E DY NA+      VP +     +  V +AD
Sbjct: 248 YKEFGIRLTLTPTVIDRSRISLKVAPEVSELDYSNAVQIQGIQVPALTVRRTDTSVSLAD 307

Query: 349 GETIVIGGVYSTSQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMSDQA 407
           GE+ VI G+ S++  + ++K P  GD+P +G  FR   +  ++ ELL+ +TP ++   A
Sbjct: 308 GESFVISGLISSNNRSTINKFPGLGDIPILGAFFRDSNISREEKELLMIVTPHLVQPLA 366