Pairwise Alignments

Query, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

Subject, 463 a.a., Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly from Variovorax sp. SCN45

 Score = 94.0 bits (232), Expect = 8e-24
 Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 241 LDLELSAMEKSGNGEIISQPKVVTADKETARILKGTEVPYQETSQSGATSVSFREASLSL 300
           + L    +E +G   ++++P +V    ++A  L G E+P       G  S+ ++   + L
Sbjct: 254 IGLNFGFLEGNGMARVLAEPTLVALSGQSASFLAGGELPIPVPQGLGTISIEYKPFGIGL 313

Query: 301 EVTPQITPDNKVIMTVRVTKDEPDYVNALNN----VPPIRKNEVNAKVRVADGETIVIGG 356
            +TP +  + ++++ V     + DY NA+      VP I     +  V + DGE+ +IGG
Sbjct: 314 TLTPTVLSNERIVLKVAPEASDLDYTNAITLNGVVVPAITTRRADTTVELGDGESFIIGG 373

Query: 357 VYSTSQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIM 403
           + S +  +   KVP  GDLP +G  F ++  Q  + EL++ +TP ++
Sbjct: 374 LVSRTTTSNASKVPMLGDLPIIGTFFSKNNYQMNEKELVILVTPHLV 420