Pairwise Alignments

Query, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

Subject, 863 a.a., General secretion pathway protein D from Variovorax sp. SCN45

 Score =  100 bits (248), Expect = 2e-25
 Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 25/286 (8%)

Query: 145 SLSVDERTNTLVVHLPADRLAEMRQLVAQLDVPVRQVAIEARIVEANVDYEKSLGVRW-G 203
           ++  D  TNTL++  P      +R+++  LD    QV +E+ IVE        LG++W  
Sbjct: 391 TVQADATTNTLIIAAPEPMYRSLRRVIDTLDQRRAQVLVESLIVEVTERDASELGIQWMA 450

Query: 204 GPLYGEKLRPGKELF-------VDLGLERAGSSIGLGLLRGDV-------LLDLEL--SA 247
           G   G  +R G               +E     + +G++ G V       +L+L++   A
Sbjct: 451 GGGNGRGVRAGTNFGGATLNPNARNTIEAMPRGLNIGIVDGTVNLPGVGEILNLKMLARA 510

Query: 248 MEKSGNGEIISQPKVVTADKETARILKGTEVPYQE--------TSQSGATSVSFREASLS 299
           ++      I+S P ++T D E A I+ G  VP+          +S +   ++   +  L 
Sbjct: 511 LQAKDGANILSTPNILTLDNEAASIMVGKTVPFVSGQYITNGNSSTNPFQTIQREDIGLK 570

Query: 300 LEVTPQITPDNKVIMTVRVTKDEPDYVNALNNVPPIRKNEVNAKVRVADGETIVIGGVYS 359
           L + PQI+    V + +       D   +  +     K  ++  + V DG+ +V+GG+  
Sbjct: 571 LNIRPQISEGGTVKLDIYQEVSTIDTQASDISGIVTNKRALDTSILVDDGQIMVLGGLME 630

Query: 360 TSQNNVVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMSD 405
            S  N  + VP  G LP VG LFR D  Q  K+ L+VFL P ++ D
Sbjct: 631 DSVANGTEAVPGLGALPVVGNLFRYDKRQRVKTNLMVFLRPYVIRD 676



 Score = 45.4 bits (106), Expect = 6e-09
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 15/186 (8%)

Query: 8   PLASATPYQGEPLSLNFQDVEVRAVLQVLADYAGVNLVASDAVQGSVTLRLQ-DVPWDQA 66
           P  +A   + + + LNF D ++ +V+  LA + G N +    V+G +TL  + +VP   A
Sbjct: 30  PAQAARAGKDDKVVLNFVDADITSVVSALARFLGRNFLFDPRVKGQITLVSEGEVPAATA 89

Query: 67  ---LDLVLRSKGLSRRQEGNVLLVAPAAEFAAQSADARVSQALDAHLQPLRRELLPIHHA 123
              L   LR +G +    G V  V P A+   Q                L      +++ 
Sbjct: 90  YGMLSTALRMRGFAIVDVGEVSRVVPVADAKLQGGSVNTRNPGGG----LATRTFRLNYE 145

Query: 124 KAADLAQLLLAGLEGDGIPPASLSVDERTNTLVVHLPADRLAEMRQLVAQLDVPVRQVAI 183
            A  +  +L   +  +     S++     NTLVV    D L  + +++  +D P    ++
Sbjct: 146 NAEAMLPVLKPLIAAEN----SINAYPANNTLVVTDYIDNLERLARIIESIDTP---TSL 198

Query: 184 EARIVE 189
           +A +V+
Sbjct: 199 DAEVVK 204