Pairwise Alignments

Query, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

Subject, 584 a.a., Type II secretion pathway protein XcpQ from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 6e-33
 Identities = 95/341 (27%), Positives = 149/341 (43%), Gaps = 57/341 (16%)

Query: 116 ELLPIHHAKAADLAQLLLAGLEGDGIPPAS----------------------LSVDERTN 153
           +++ + HA A ++ ++L  GL  +G  P                        L  +E TN
Sbjct: 202 QVIYLRHANAGEVVKVL-RGLSQEGAVPVEGAGEAEGKDRPVVPAAGGSGIRLEYEEGTN 260

Query: 154 TLVVHLPADRLAEMRQLVAQLDVPVRQVAIEARIVEANVDYEKSLGVRWG---------- 203
            +V+  P   LA  R +V QLD+   QV +EA I E +    + LGV+W           
Sbjct: 261 AVVMVGPDSELAAYRAIVEQLDIRRAQVVVEAIIAEVSDSSAQELGVQWLFADEKFGAGI 320

Query: 204 ----------GPLYGEKLRPGKELFVDLGLERAGSSIGLGLLRGDVLLDLELSAMEKSGN 253
                       + G       E   DL     G++ G+G   G     + ++A++    
Sbjct: 321 VNFGSNGVNIASIAGAAASGDNEALGDLLSTTTGATAGIGHFGGGFNFAMLVNALKGKSG 380

Query: 254 GEIISQPKVVTADKETARILKGTEVPYQETS--QSGAT---SVSFREASLSLEVTPQITP 308
             ++S P ++T D   A IL G EVP+   S  Q+ A    ++  +E  + L + PQI  
Sbjct: 381 FNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQTIERKEVGVKLRIKPQINI 440

Query: 309 DNKV----IMTVRVTKDEPDYVNALNNVPPIRKNEVNAKVRVADGETIVIGGVYSTSQNN 364
           DN V    +  V    D     + + N     K E+  KV V D   +++GG+ S   + 
Sbjct: 441 DNSVRLDIVQEVSSIADTSSASDVITN-----KREIKTKVMVEDNGLVILGGLISDELST 495

Query: 365 VVDKVPFFGDLPYVGRLFRRDALQEKKSELLVFLTPRIMSD 405
              +VP  GD+PY+GRLFR DA +  K  L+VF+ PRI+ D
Sbjct: 496 SDQRVPLLGDIPYLGRLFRSDATRNTKQNLMVFIRPRILRD 536



 Score = 29.3 bits (64), Expect = 3e-04
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 11/70 (15%)

Query: 1  MATLLSIPLASATPYQGEPL---------SLNFQDVEVRAVLQVLADYAGVNLVASDAVQ 51
          MA  LS+ L+ A  Y  EP+          +NF D E+   +  ++   G   +    V+
Sbjct: 7  MAAALSLALSMA--YAQEPVFDDNGTPMYEVNFVDTELGEFIDSVSRITGTTFIVDPRVK 64

Query: 52 GSVTLRLQDV 61
          G VT+R  D+
Sbjct: 65 GKVTVRTVDL 74