Pairwise Alignments

Query, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

Subject, 694 a.a., Type IV pilus biogenesis protein PilQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  308 bits (789), Expect = 3e-88
 Identities = 190/444 (42%), Positives = 261/444 (58%), Gaps = 48/444 (10%)

Query: 6   SIPLASATPYQGEPLSLNFQDVEVRAVLQVLADYAGVNLVASDAVQGSVTLRLQDVPWDQ 65
           S  L     Y GE LSLNFQ++EVR++LQV+AD+   N+V SD+V G+VTLRL+DVPWDQ
Sbjct: 257 STKLTQGPGYSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDSVTGAVTLRLKDVPWDQ 316

Query: 66  ALDLVLRSKGLSRRQEGNVLLVAPAAEFAAQSADARVSQALDAHLQPLRRELLPIHHAKA 125
           ALD++L++KGL  R+ GNVL +AP  E AA+      S+     L+ LR +   +++AKA
Sbjct: 317 ALDIILQAKGLGMRKSGNVLWIAPKDEIAAREKQELESKVSIESLETLRTQGFQMNYAKA 376

Query: 126 ADLA-QLLLAGLEGDGIPPASLSVDE-------RTNTLVVHLPADRLAEMRQLVAQLDVP 177
           AD+A QL   G  G G   A +  D        RTN L V   A RL ++++L+ +LD+P
Sbjct: 377 ADIATQLTSTGSGGSGSTSARILSDRGSVISEPRTNQLFVTDIASRLEQVQELIRKLDIP 436

Query: 178 VRQVAIEARIVEANVDYEKSLGVRWGG-------------PLYGE------KLRPGKEL- 217
           +RQV IEARIVEA+  + KSLGVR GG             P+ G           G  L 
Sbjct: 437 IRQVMIEARIVEADDTFGKSLGVRLGGGVRGFNAGSANGNPIQGNFGSNYGAATTGPTLT 496

Query: 218 ---FVDLGLERA---GSSIGLGLLRGDV--LLDLELSAMEKSGNGEIISQPKVVTADKET 269
              FV+L    +    +S  L L        L LE+SA+E  G G I+S P+VVTAD+  
Sbjct: 497 SAPFVNLPANPSTAQAASFALSLFNPSASRFLSLEISALESDGKGRIVSSPRVVTADQVK 556

Query: 270 ARILKGTEVPYQETSQSGATSVSFREASLSLEVTPQITPDNKVIMTVRVTKDE-----PD 324
           A I +GTE PYQ  + SGAT+++FR+A+L LEVTPQITP+  +I+ + + KD      PD
Sbjct: 557 ALIEQGTEFPYQTATSSGATAIAFRKANLKLEVTPQITPEGNIILDLDINKDSRGESTPD 616

Query: 325 YVNALNNVPPIRKNEVNAKVRVADGETIVIGGVYSTSQNNVVDKVPFFGDLPYVGRLFRR 384
            +        I    V  +V V +G T+VIGG++  ++ + V+KVP  GDLP VG LF+ 
Sbjct: 617 GI-------AINTKHVQTQVLVENGGTVVIGGIFEQTERDEVNKVPLLGDLPAVGNLFKS 669

Query: 385 DALQEKKSELLVFLTPRIMSDQAI 408
                 KSELL+F+TPR++   AI
Sbjct: 670 RNRIANKSELLIFITPRVLGRSAI 693