Pairwise Alignments

Query, 425 a.a., efflux transporter from Pseudomonas putida KT2440

Subject, 425 a.a., transporter from Pseudomonas simiae WCS417

 Score =  125 bits (314), Expect = 2e-33
 Identities = 99/394 (25%), Positives = 180/394 (45%), Gaps = 11/394 (2%)

Query: 37  TPAFMKTVLALFSGGFATFALLYCVQPMMPLLSREFAINAAQSSLVLSVSTAMLAFGLLI 96
           +P     VL L      + A +Y  QP++  ++  FA++ A   ++++++      GLL+
Sbjct: 6   SPLSGAVVLLLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYGVGLLL 65

Query: 97  TGPISDRIGRKPVMVFALVCAALSTLASAVMPSWELVLATRALVGLSLSGLAAVAMTYLS 156
             P+ D + R+ ++V  L+ + L+ L      S   +LA  AL GL L+ +A V +   +
Sbjct: 66  LVPLGDLLNRRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGL-LAVVAQVLVALAA 124

Query: 157 EEIHPQHIGLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMLTIGGLALVAALVFWKV 216
               P+  G  +GL   G  +G +  R ++G + D   W +  L   GL L+ A++ W+V
Sbjct: 125 HLASPEQRGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILLWRV 184

Query: 217 LPESRNFRAQTMNPRSLLDGFVMHFKDAGLPWLFLEAFLLMGAFVTLFNYIGYRLLAEPY 276
           LP +   RA       +   F +  ++  L    + A L+  A   L+  +   L A P 
Sbjct: 185 LPSTEPPRASGTYGALIRSVFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLSAPPL 244

Query: 277 HMNQALVGLLSVVYLSGIYSSAQVGALADKLGRRKVFWASIVVMAVGLLMTLA-----SP 331
            ++   +GL  +   +G   +A  G LAD   +    W S   + + LL  +A     S 
Sbjct: 245 SLSHTQIGLFGLAGATGALGAAHAGRLAD---QGLAQWTSGTALLLMLLSWVAIGFTQSS 301

Query: 332 LVMVIVGMLVFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFCYYAGSSVAGTAGGVFW 391
           L  +++G++VF  G    H  + S I      A+ +  + Y+  Y  GS++   +    +
Sbjct: 302 LWALLLGVIVFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYMLFYSVGSALGSISATAMY 361

Query: 392 HQWGWNGIGLFIGSLLAVALMVALHLSKLPPKTV 425
              GW G+ +   ++  +AL+    L+ LPPK V
Sbjct: 362 AWGGWIGVCVLGAAINLLALV--YWLATLPPKPV 393