Pairwise Alignments

Query, 425 a.a., efflux transporter from Pseudomonas putida KT2440

Subject, 446 a.a., 4-hydroxybenzoate transporter from Pseudomonas simiae WCS417

 Score = 84.7 bits (208), Expect = 5e-21
 Identities = 110/415 (26%), Positives = 170/415 (40%), Gaps = 61/415 (14%)

Query: 45  LALFSGGFATFALLYCVQPMMPLLSREFAINAAQSSLVLSVSTAMLAFGLLITGPISDRI 104
           L +F  G  T A+ +    + P LS+++ I+ A    V+S +   + FG L +GP++DR 
Sbjct: 34  LIVFLDGLDTAAMGF----IAPALSQDWGIDRASLGPVMSAALIGMVFGALGSGPLADRF 89

Query: 105 GRKPVMVFALVCAALSTLASAVMPSWELVLATRALVGLSLSGLAAVAMTYLSEEIHPQHI 164
           GRK V+V A++     +LASA   + + +L  R L GL L      A T LSE    +H 
Sbjct: 90  GRKVVLVGAVLVFGAFSLASAYSSNVDQLLVLRFLTGLGLGAGMPNATTLLSEYTPERHK 149

Query: 165 GLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMLTIGG---LALVAALVFWKVLPESR 221
            L +     G  +G   G  I+  LI    WH A+L IGG   L LV  L+ W  LPES 
Sbjct: 150 SLLVTSMFCGFNLGMAGGGFISAKLIPAFGWH-ALLLIGGILPLILVVVLMLW--LPESA 206

Query: 222 NF--------------------------------RAQTMNPRSLLDGFVMHFKDAGLPWL 249
            +                                  +T+  R++          AG   L
Sbjct: 207 RYLVVRNRGTDKVRKTLSPIDPVIVGQATSFSVPEQKTVKARNVFAVIFSGTYSAGTLLL 266

Query: 250 FLEAFLLMGAFVTLFNYIGYRLLAEPYHMNQ-ALVGLLSVVYLSGIYSSAQVGALADKLG 308
           +L  F+ +     L +++   +      + Q A +G L      G+ S+  VG   D+  
Sbjct: 267 WLTYFMGLVIVYLLTSWLPTLMRDSGASLEQAAFIGAL--FQFGGVLSAVGVGWAMDRFN 324

Query: 309 RRKV-----FWASIVVMAVGLLM---TLASPLVMVIVGMLVFTFGFFGAHSVASSWIGRR 360
             KV       A +   AVG  +   TL + LV+ I GM V      GA S   S +  R
Sbjct: 325 PHKVIGSFYLLAGVFAYAVGQSLGNITLLATLVL-IAGMCV-----NGAQSAMPS-LAAR 377

Query: 361 ALKAKGQASSL-YLFCYYAGSSVAGTAGGVFWHQWGWNGIGLFIGSLLAVALMVA 414
               +G+A+ + ++       ++ G   G      GWN   +    ++  AL  A
Sbjct: 378 FYPTQGRATGVSWMLGIGRFGAILGAWMGATLLGLGWNFEQVLTALVIPAALATA 432



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 272 LAEPYHMNQALVG-LLSVVYLSGIYSSAQVGALADKLGRRKVFWASIVVM-AVGLLMTLA 329
           L++ + +++A +G ++S   +  ++ +   G LAD+ GR+ V   +++V  A  L    +
Sbjct: 53  LSQDWGIDRASLGPVMSAALIGMVFGALGSGPLADRFGRKVVLVGAVLVFGAFSLASAYS 112

Query: 330 SPLVMVIVGMLVFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFC-YYAGSSVAGTAGG 388
           S +  ++V   +   G       A++ +     +         +FC +  G +  G    
Sbjct: 113 SNVDQLLVLRFLTGLGLGAGMPNATTLLSEYTPERHKSLLVTSMFCGFNLGMAGGGFISA 172

Query: 389 VFWHQWGWNGIGLFIGSLLAVALMVALHL 417
                +GW+ + L IG +L + L+V L L
Sbjct: 173 KLIPAFGWHAL-LLIGGILPLILVVVLML 200