Pairwise Alignments

Query, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

Subject, 311 a.a., LysR family transcriptional regulator STM3121 from Variovorax sp. SCN45

 Score =  185 bits (470), Expect = 1e-51
 Identities = 114/296 (38%), Positives = 167/296 (56%), Gaps = 5/296 (1%)

Query: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60
           M++R LRYF+AVA   H  RAA+QLGI QPPLS QI+ALE+ELG  LF R  R V L++A
Sbjct: 1   MDIRALRYFVAVAGTGHMTRAAEQLGIQQPPLSLQIKALERELGMPLFRRHPRGVALTDA 60

Query: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120
           GRLF  EA ++L  +E       R   G+   + +GFTSSA     +P+A+ AFR+ +P 
Sbjct: 61  GRLFQAEALRMLQDMESMKQRMARVAKGQADTLAVGFTSSAAAHRFMPEALRAFRRAYPL 120

Query: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMR-PMPLPEGLVATELFREPLVAVINASHPLA-- 177
           V L L+E ++ ++ + +    +  GL+R P+  PEGLV   + REP++  + + H  A  
Sbjct: 121 VELQLREDNAAELTDALAAGRLHCGLLRVPVARPEGLVFETMLREPVLVAMPSDHRFALA 180

Query: 178 -EGTEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLV 236
                + + +A L  E  +   R    GL+A+LL+L    G  P    E    MT + LV
Sbjct: 181 RTKASRPLPLARLCEEGIILVRRPGAPGLYAELLALCHAKGLRPRVVAEVDRMMTNLNLV 240

Query: 237 SAGLGVSVLPASFQRMRIEGVVYRTLLDEEAMTA-VWLVQRERGHSVMAKAFAELL 291
           +AG+G+SV+PAS   +    + Y  L D   + A + LV R    ++ A+ FA LL
Sbjct: 241 AAGVGLSVVPASMTGVHAHAIAYTRLADGGQLDAPLTLVSRAEEDNLPAQHFAALL 296