Pairwise Alignments

Query, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

Subject, 297 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  273 bits (697), Expect = 5e-78
 Identities = 143/274 (52%), Positives = 193/274 (70%), Gaps = 2/274 (0%)

Query: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60
           +ELRHLRYF+AVAEELHFGRAA +L ISQPPLSQQIQALEQ++GARL  RTNR V L+ A
Sbjct: 3   IELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAA 62

Query: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120
           G+ FL ++RQ+L+ V+ AA  A R   GE GE++IGFTSSAPF   +   +  FR+ +P 
Sbjct: 63  GKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPD 122

Query: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGT 180
           VHL  +EM++R+    + + ++++GL+R   LPE L    +  EPL+A+I   HPLA   
Sbjct: 123 VHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLA--N 180

Query: 181 EQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGL 240
              V +A LA EPFVFF    G+GL+  +L L R    +P   QE GEAMTIIGLVSAGL
Sbjct: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240

Query: 241 GVSVLPASFQRMRIEGVVYRTLLDEEAMTAVWLV 274
           GVS+LPASF+R+++  + +  + +E+A++ +WLV
Sbjct: 241 GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLV 274