Pairwise Alignments

Query, 565 a.a., choline dehydrogenase from Pseudomonas putida KT2440

Subject, 571 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

 Score =  203 bits (517), Expect = 1e-56
 Identities = 189/598 (31%), Positives = 259/598 (43%), Gaps = 101/598 (16%)

Query: 1   MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAG---GPDYRFD-FRTQMPAALAFP 56
           M+Q  DY+I+G G+AG  LA RL+EDAG  V+L+EAG    PD   D  R++ P      
Sbjct: 1   MAQPIDYLILGGGTAGCALAARLSEDAGKRVVLVEAGRDLRPDAMSDSIRSRYPGLAYLD 60

Query: 57  LQGRRYNWAYETDPEPYMDGRRMECG--RGKGLGGSSLINGMCYIRGNAMDFDGWAELPG 114
            Q             P     R   G  +G+ LGG S IN M   RG   D+D WA L G
Sbjct: 61  KQNIWTALVATVSGAPTRQPNRTPRGYEQGRVLGGGSAINAMVANRGAPDDYDEWARL-G 119

Query: 115 LEDWTYLDCLPYFRKAETRDIGPND-YHGGEGPVSVTTPKAGN-NPLFHAMVEAGVQAGY 172
            E W+    L YFRK E RD   +D YHG  GPV V        +P   A+  +    G+
Sbjct: 120 AEGWSGEVALKYFRKLE-RDCDFDDAYHGRGGPVPVRRLAPERVSPFVQAVCRSLRMRGH 178

Query: 173 PRTEDLNGYQQEGFGPMDRTVTKNGRRSSTARGYL-DQAKKRPNLTIVTHALTDRVLFDG 231
           P+  D NG  ++G  P     + +G+R   +  YL  + + R NL IVT     R+LF+G
Sbjct: 179 PQYPDQNGEWKDGVFPAAIATSDDGQRVPASIVYLTPEVRARKNLRIVTDTHVQRLLFEG 238

Query: 232 KRAIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDL 291
            R  G       +E   +       IV  G I S  LL RSG+GP A L +L I V  D 
Sbjct: 239 ARVTG-------AEAGGQPMHAAHTIVCMGGIHSAALLMRSGIGPAADLRALGIEVKADR 291

Query: 292 PGVGENLQDHLELYLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFI 351
           PGVG NL +H  L        P S    L   +  A+     +    I            
Sbjct: 292 PGVGMNLMEH-PLTAVSTYLPPASRMKDLAEHHDQAL---LRYTSKSI------------ 335

Query: 352 RTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSM-----RSPARGRIQVKSKDP 406
                   PN     + VAI          H     MG+M     +S +RG ++++S DP
Sbjct: 336 --------PNAPAGDMHVAI----IGRTAWHAIGQRMGTMLIWVNKSYSRGTVKLRSADP 383

Query: 407 RQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRG-----------REIS-PGA 454
            + P + F  +S  +D    ++G  +    +    LD  RG           R++S PGA
Sbjct: 384 LEEPVVDFRLLSDPRDLARLKEGFGVAARALGDANLDGVRGPVFPTSYSERVRKVSAPGA 443

Query: 455 -----------------------------------DVQTDE-QLDKFIREHAETAFHPSC 478
                                              D+  D+ +L +FI       +H S 
Sbjct: 444 WNAFQMGALSFILDWAGPLRGAIVHGLITLGVRIDDLLNDDAKLTEFIGNGVAGVWHASG 503

Query: 479 SCKMGT--DDMAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
           +CKMG   D  AV DG GRV+G++GLRV D+SIMP I   N N  T+M+ E+I+D I+
Sbjct: 504 TCKMGAGDDPTAVTDGAGRVYGVEGLRVCDSSIMPSIPRANTNMPTLMLTERIADLIK 561