Pairwise Alignments

Query, 565 a.a., choline dehydrogenase from Pseudomonas putida KT2440

Subject, 525 a.a., Oxidoreductase, GMC family from Sphingobium sp. HT1-2

 Score =  359 bits (921), Expect = e-103
 Identities = 224/531 (42%), Positives = 300/531 (56%), Gaps = 18/531 (3%)

Query: 5   FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
           +DYII+G GSAG  +A RL+ D+   V L+EAG  D R  F   MP  +    +    NW
Sbjct: 2   YDYIIIGGGSAGCVMANRLSADSDKAVCLIEAGPRD-RNPF-IHMPLGVGVIARTGWVNW 59

Query: 65  AYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTYLDCL 124
             ET+ EP+++ RR+   RGK LGGSS IN M YIRG+  D++GW    G  DW +    
Sbjct: 60  NCETEVEPHLNNRRLYWPRGKTLGGSSSINAMVYIRGDRADYEGWGAAAGA-DWDWPRMR 118

Query: 125 PYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQE 184
             F   E      +++HG  GP+ V+      NPL    VEAGV+  YPR  D NG  QE
Sbjct: 119 ELFIALENNQAIHDEHHGNAGPLCVSN-LGRVNPLTEDFVEAGVELHYPRNPDFNGVSQE 177

Query: 185 GFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYLVGDS 244
           GFG    T  K+G+R STAR +LD A+ R NL I T+ L +R+LF  +RAIGV   VG  
Sbjct: 178 GFGVYQVT-QKDGQRFSTARAFLDPARSRKNLAIETNGLVERILFKDRRAIGVR--VGGR 234

Query: 245 EERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQDHLEL 304
           +  +  R   EVI+S+GA+ SPQ+L  SGVGP + L    I +V D P VG NL DHL+ 
Sbjct: 235 D--LLLRPGGEVILSAGAVNSPQILMLSGVGPASELRQHGIEIVLDAPEVGANLADHLD- 291

Query: 305 YLQYACT---QPVSLYPSLLWWNQPAIGAEWMF--NGTGIGASNQFEAGGFIRTRPEFKW 359
           Y   A T   +   + PS L     AI   W +  +  G   SN  E G F+++    + 
Sbjct: 292 YTAVATTADREGFGVAPSFL---PRAIRGAWSYFLHHEGELTSNASEGGVFLKSDAGRER 348

Query: 360 PNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQVKSKDPRQHPSILFNYMST 419
           PN+Q+HFLP  +  +G      +G   H+  +   +RGRI +K  DP  HP I  NY+S 
Sbjct: 349 PNLQFHFLPAILRDHGRKTAFGYGMTVHVCDLLPKSRGRIGLKIADPTAHPRIEGNYLSH 408

Query: 420 EQDWQEFRDGIRLTREIMAQPALDPYRGREISPGADVQTDEQLDKFIREHAETAFHPSCS 479
             D     +G +L R+++  PAL  +   E+ PG  VQTDE L   IR  AET +HP  +
Sbjct: 409 PDDVGVLLNGAKLARKLLHAPALARHLREEVRPGPAVQTDEALIDDIRARAETIYHPVGT 468

Query: 480 CKMGTDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTIMIAEKIS 530
           C+MG+D  +VVD   RV G+ GLRVVDASIMP I++GN NA T+ IAE ++
Sbjct: 469 CRMGSDSASVVDPAARVRGIDGLRVVDASIMPSIVSGNTNAPTMAIAENVA 519