Pairwise Alignments

Query, 478 a.a., two-component system DNA-binding transcriptional dual regulator GlnL/GlnG from Pseudomonas putida KT2440

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  306 bits (785), Expect = 7e-88
 Identities = 186/473 (39%), Positives = 276/473 (58%), Gaps = 23/473 (4%)

Query: 4   SETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMGRLARQQPDV--IISDIRMPGT 61
           +  + +VDD+  +  +L  AL Q  +  Q F + +G+      +Q D+  +ISD RMPG 
Sbjct: 2   THNILVVDDEPKLCDLLASALGQNDV--QVFIAGNGLHALKVLEQEDIDLVISDWRMPGM 59

Query: 62  SGLDLLAQIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQ 121
            G  LLA+I+ ++P +PVI+MTA+S + +AV S + GA++Y+ KPFD+DE    V +A Q
Sbjct: 60  DGPALLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQ 119

Query: 122 -------HAQEQQGLDVPQNLARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTG 174
                  +A+ +  LD     A+   ++G++PA ++V +A+  +  S+ T+L+ GESGTG
Sbjct: 120 FRDIMRDNARLRAELD---EHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTG 176

Query: 175 KELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADG 234
           KE+VA A+H+H  RA  PF+A+N AAIP+ L+ESE+FGH KGAFTGA   R GRF+QAD 
Sbjct: 177 KEMVARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADK 236

Query: 235 GTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQNLESLVQAGKF 294
           GTLFLDE+GDMP   Q ++LR L +     VG     KVDVR+IAAT++NL   V   +F
Sbjct: 237 GTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEF 296

Query: 295 REDLFHRLNVIRIHIPRLADRREDIPALARHFLARAAQELAVEPKILKPETEEFIRNLPW 354
           REDL++RLNV  I +P L +R EDI  LARHF    +            E  + +    W
Sbjct: 297 REDLYYRLNVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHW 356

Query: 355 PGNVRQMENTCRWITVMASSREVLIGDLPPELLNLPHDAAPVTNWEQALRQWADQALARG 414
           PGN+R+++N     T++A+S  +   DLP  L     +   VT         A  +   G
Sbjct: 357 PGNIRELQNCVERATIVAASPVIEDIDLPGYLFASKPNQGDVT---------AILSDGPG 407

Query: 415 QTSLLDSAVPSFERIMIETALKHTAGRRRDAALLLGWGRNTLTRKIKELGMNV 467
               LD+A+   E+  I  AL+ + G +  AA  +G    +   ++K+LG+ V
Sbjct: 408 IPQDLDAALAEVEKAYILAALQESNGVQAAAAAKIGISERSFWYRLKKLGIQV 460