Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 264 a.a., cystine transporter subunit from Pseudomonas simiae WCS417

 Score =  118 bits (296), Expect = 1e-31
 Identities = 78/261 (29%), Positives = 141/261 (54%), Gaps = 11/261 (4%)

Query: 2   IKKYLSRLLVGVT--ALVAVTAAQAGA---IDDAVKRGTLRVGMDPTYMPFQMTNKRGEI 56
           I  +   LLVG    AL A    QA A   +D+  K G +++G++ TY PF   ++ G++
Sbjct: 3   ISVFRRTLLVGTLGLALGAGLLGQAVAGEQLDNIKKAGEIKIGLEGTYPPFSFVDESGKL 62

Query: 57  IGFEVDILKAMAKSMGVKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLNFSEP 116
            GFEV++ +A+AK +GVK +  +T +DGI+ AL + + D + + +T+++ER  + +FS+P
Sbjct: 63  SGFEVELSEALAKELGVKVKLQATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKP 122

Query: 117 FIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHGYDNEQE 176
           + V G   L+  +  G IK+  DL  +K  +   LGT  E   K    KA    Y+++  
Sbjct: 123 YTVSGIQALVLTKNVGTIKTADDLAGKKVGV--GLGTNYEQWLKDNQPKAIIKTYNDDPT 180

Query: 177 AVMDVVNGKADAFVYDAPYNVVAVDKAGAGK-LLFLDEPFTYEPLAFGLKKGDYDSINFI 235
              D+  G+ D  + D    + A++ A   K      + F+ +     L+KG+ + ++ +
Sbjct: 181 KFQDLRIGRIDTILID---RLAALEYAKKAKDTSVTGDAFSRQEAGIALRKGEPELLDAV 237

Query: 236 NNFLHQIKHDGTYDRIHDKWF 256
           N  L +++ DGT  ++ +K+F
Sbjct: 238 NKALDKLRADGTLKKLSEKYF 258