Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  101 bits (252), Expect = 1e-26
 Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 12/248 (4%)

Query: 16  LVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFEVDILKAMAKSMGVKF 75
           L A+    A     A +   LR G+DP+Y PF+     G ++GF++D+  A+   + VK 
Sbjct: 8   LSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAELKVKC 67

Query: 76  EAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLNFSEPFIVVGQTLLIRKELAGEIK 135
           + V + +DG+IP L  +KFD + S MT+T  R   ++FS   +  G T L+ K+ AG   
Sbjct: 68  KWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSE-LFSGPTSLVFKKGAG--- 123

Query: 136 SYKDLNNEKYRLTS-KLGTTGEMVSKKLISKA--KYHGYDNEQEAVMDVVNGKADAFVYD 192
            Y    + K +    + GT  E  +K ++ KA      Y N+ +   D+ +G+ DA V D
Sbjct: 124 -YSTPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQD 182

Query: 193 APYNVVAVDKAGAGK----LLFLDEPFTYEPLAFGLKKGDYDSINFINNFLHQIKHDGTY 248
                +   K+ AG        +D+P      A G+KKG+ +    ++  +  +  DGTY
Sbjct: 183 MLQAELGFLKSPAGAGYEVSAAIDDPLLPSKTAIGIKKGNTELKTLLDKGIKALHDDGTY 242

Query: 249 DRIHDKWF 256
             I  K F
Sbjct: 243 ATIQKKHF 250