Pairwise Alignments

Query, 235 a.a., Ribosomal RNA small subunit methyltransferase E from Pseudomonas putida KT2440

Subject, 244 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score = 62.8 bits (151), Expect = 6e-15
 Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 4/212 (1%)

Query: 26  HMQEIHRVAVGDNLRVGRINGLMGRATVLRLEKHEAELEVAFDQ--QPPAKLPLTLVLAV 83
           H+  + R+  GD L V   +G    A +L + K E  + +   Q  +  + LPLTL   V
Sbjct: 27  HVARVLRMNPGDPLTVFNGDGHDYAAIILAMGKRELSVRIESKQLVRNESPLPLTLAQGV 86

Query: 84  PRPKMLRRLFQTVATLGVPRLILLNSYKVEKSFWQTPFLQPDTI-RENLILGLEQARDTV 142
            R + +  + Q    LGV R++ L + + E     T   +     R  +    EQ+    
Sbjct: 87  ARGEKMDLIVQKATELGVARIVPLLTERSEVKLDATRAERRLAHWRAVVASACEQSGRAR 146

Query: 143 LPEVIIEKRFKPFVEDRLPTIAAGTLGLVGHPGPYPACPRAVEQAVTLAIGPEGGWIPYE 202
           LPEV        ++ D L    A  L L+   G      R       L +GPEGG    +
Sbjct: 147 LPEVAPALPLAAWLHD-LADDGALRLALLPEAGRASRELRFTAAGGLLVVGPEGGLGERD 205

Query: 203 VDLLGKAGLAPVQLGDRILRVETAVTALLSRI 234
           V  LG AG   +QLG R+LR ETA  A L+ +
Sbjct: 206 VGALGAAGFEGLQLGPRVLRTETAGLAALAAL 237