Pairwise Alignments

Query, 235 a.a., Ribosomal RNA small subunit methyltransferase E from Pseudomonas putida KT2440

Subject, 239 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 8/217 (3%)

Query: 19  LADRRFTHMQEIHRVAVGDNLRVGRINGLMGRATVLRLEKHEAELEV--AFDQQPPAKLP 76
           L + +  ++  + R+  GD +++   +GL  R ++L + K    +++  +F  Q  + L 
Sbjct: 19  LPEAQAHYISRVLRMGEGDAVQLFDGSGLEFRGSLLEVGKKRVTVQLTESFSGQTESPLR 78

Query: 77  LTLVLAVPRPKMLRRLFQTVATLGVPRLILLNSYKVEKSFW-QTPFLQPDTIRENLILGL 135
           + L   + R + +    Q    LGV  +  + S + E     +    +    R+  I   
Sbjct: 79  IHLGQGLSRGERMDWAIQKATELGVSEITPIFSDRCEVRLKDERADKRLQHWRQVAISAC 138

Query: 136 EQARDTVLPEVIIEKRFKPFVEDRLPTIAAGTLGLVGHPGPYPACPRAVEQAVTLAIGPE 195
           EQ   + +P +        +++          L LV HP   P    A   ++   IGPE
Sbjct: 139 EQCGRSTVPVIHPPLLLVDWLKQ-----TQADLKLVLHPVAEPMVSHAKPSSLAFLIGPE 193

Query: 196 GGWIPYEVDLLGKAGLAPVQLGDRILRVETAVTALLS 232
           GG    EVD    AG    +LG R+LR ETA    L+
Sbjct: 194 GGLTDLEVDTAQAAGYHAARLGPRVLRTETAPVVALA 230