Pairwise Alignments

Query, 235 a.a., Ribosomal RNA small subunit methyltransferase E from Pseudomonas putida KT2440

Subject, 239 a.a., 16S rRNA m3U1498 methyltransferase from Pseudomonas putida KT2440

 Score = 45.8 bits (107), Expect = 7e-10
 Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 8/217 (3%)

Query: 19  LADRRFTHMQEIHRVAVGDNLRVGRINGLMGRATVLRLEKH--EAELEVAFDQQPPAKLP 76
           L + +  ++  + R+A GD +++   +G   R  +L + K      L+ AF  Q  + L 
Sbjct: 19  LPEAQAHYIGRVLRMAPGDAVQLFDGSGQEYRGQLLEVGKKTVRVSLDQAFAGQADSPLH 78

Query: 77  LTLVLAVPRPKMLRRLFQTVATLGVPRLILLNSYKVEKSFW-QTPFLQPDTIRENLILGL 135
           + L   + R + +    Q    LG   +  + S + E     +    +    R+  I   
Sbjct: 79  VHLGQGLSRGERMDWAIQKATELGANEITPIVSERCEVRLKDERADKRLAHWRQVAISAC 138

Query: 136 EQARDTVLPEVIIEKRFKPFVEDRLPTIAAGTLGLVGHPGPYPACPRAVEQAVTLAIGPE 195
           EQ   + LP +       P       +     L LV HP   P         +   IGPE
Sbjct: 139 EQCGRSTLPVI-----HPPVTLAEWLSSTKADLKLVLHPVAEPLISHEKPATLAFVIGPE 193

Query: 196 GGWIPYEVDLLGKAGLAPVQLGDRILRVETAVTALLS 232
           GG    EV+    AG    +LG R+LR ETA    LS
Sbjct: 194 GGLSEAEVEQAKAAGFHAARLGPRVLRTETAPVVALS 230