Pairwise Alignments

Query, 235 a.a., Ribosomal RNA small subunit methyltransferase E from Pseudomonas putida KT2440

Subject, 235 a.a., RNA methyltransferase, RsmE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 52.4 bits (124), Expect = 8e-12
 Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 12/227 (5%)

Query: 5   LLEEADFVSANRVVLADRRFTHMQEIHRVAVGDNLRVGRINGLMGRATVLRLEKHEAELE 64
           L  + D   +  + L      H+ ++ R  VGD + +    G +    + + +   AEL 
Sbjct: 3   LFYQKDIPESGNITLHPEESKHLVKVLRKNVGDEVFMTDGKGHLFSCQITKGDLKRAELS 62

Query: 65  VAFDQQPPAKLPLTLV-LAVPRPKMLRRL---FQTVATLGVPRLILLNSYKVEKSFWQTP 120
           +   +  P  LP   + LA+   K   R+    + +  +G  +L  + +   E+SF    
Sbjct: 63  IIEKKATP--LPDHHIHLAIAPTKNTDRMEWMLEKITEIGFSKLTFIKTSNSERSF---- 116

Query: 121 FLQPDTIRENLILGLEQARDTVLPEVIIEKRFKPFVEDRLPTIAAGTLGLVGHPGPYPAC 180
            L+PD + + ++   +Q+  T  P +     F+  ++          +  V     +   
Sbjct: 117 -LKPDRLEKKMVSACKQSLKTHFPIIDPLTSFEELLDKHAQDDLQKFIAYVDENHRHHLF 175

Query: 181 PRA-VEQAVTLAIGPEGGWIPYEVDLLGKAGLAPVQLGDRILRVETA 226
             A  + A  + IGPEG + P E++L    G  PV LG   LR ETA
Sbjct: 176 EVAKAKGAYLILIGPEGDFSPEEINLAKAKGFIPVSLGHSRLRTETA 222