Pairwise Alignments

Query, 283 a.a., Poly(3-hydroxyalkanoate) depolymerase from Pseudomonas putida KT2440

Subject, 300 a.a., cultivar specificity protein W78 from Agrobacterium fabrum C58

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 77/267 (28%), Positives = 114/267 (42%), Gaps = 23/267 (8%)

Query: 16  SIRTAVRPGKPHL-TPLLIFNGIGANLELVFP-FIDALDPDLEVIAFDVPGVGGSSTPRN 73
           +IR A R   PH  TPL++ N  GA L+   P  +D L     ++  D  G+G S     
Sbjct: 39  NIRFAYRELGPHGGTPLVLLNHWGAVLDNFDPRIVDGLASSHHIVVLDYRGIGLSGGTA- 97

Query: 74  PYRFPGLAKLTARMLDYLDYGQVNVIGVSWGGALAQQFAHDYPERCKKLVLAATA----- 128
           P     +A+    ++  L +  V+++G S GG +AQ  A   P+  +KL+L  T      
Sbjct: 98  PVTIDEMARDVIAVIGKLGFSTVDLMGFSLGGFVAQDIALKTPDLVRKLILTGTGPAGGA 157

Query: 129 ----AGAVMVPGKPKVLWMMASPRRYVQPSHVIRIAPMIYGGGFRRDPDLAMHHAAKVRS 184
                GAV  P   K +  +  P+ Y      +       G    +D    +      R 
Sbjct: 158 GIERVGAVSWPLILKGILTLRDPKTY------LFFTSTTNGRRAAKDFLARLKERKMGRD 211

Query: 185 GGKLGYYW--QLFAGLGW--TSIHWLHKIRQPTLVLAGDDDPLIPLINMRLLAWRIPNAQ 240
            G   Y +  QL A   W   +   L +I  P LV  GD+D ++P  N R +A RIPNA+
Sbjct: 212 KGATPYAFLRQLAAIKAWGRQAPQDLGRIHIPVLVANGDNDIMVPTSNSRDIARRIPNAE 271

Query: 241 LHIIDD-GHLFLITRAEAVAPIIMKFL 266
           L I +D GH  +        P  + FL
Sbjct: 272 LVIYEDAGHGGIFQYHAEFVPKALAFL 298