Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 421 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 45/102 (44%), Positives = 71/102 (69%), Gaps = 3/102 (2%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELRA---EVTPKNILMIGPTGV 60
           TP EI   L+ ++IGQ+ AKR +++A+ N ++R++   + +    E++  NIL+IGPTG 
Sbjct: 67  TPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKGDDVELSKSNILLIGPTGS 126

Query: 61  GKTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDL 102
           GKT +A+ LA++ + PF+  +AT  TE GYVG DVE+II+ L
Sbjct: 127 GKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKL 168



 Score = 77.4 bits (189), Expect = 8e-19
 Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 57/212 (26%)

Query: 249 QHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLIEGCTV-----------NTKLG 295
           Q GIV+IDEIDK++++ +      DVS EGVQ+ LL LIEG              N    
Sbjct: 180 QRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFL 239

Query: 296 MVKTDHILFIASGAFH-LSK---------------------------------PSDLV-- 319
            + T +ILFI  GAF  L K                                 P DL+  
Sbjct: 240 QIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKAQRSITEVFREVEPEDLIKF 299

Query: 320 ---PELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQALLKTEGLNIEFLADGIKRL 376
              PEL GR+P+   L  L+ +   +IL EP  ++ +Q+  LL+ EG+++E     +K +
Sbjct: 300 GLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQMEGVDLEIRPAALKAI 359

Query: 377 AEIAYQVNEKTENIGARRLHTLLERLLEEVSF 408
           A  A          GAR L ++LE+ L +  F
Sbjct: 360 ARKAL-----ARKTGARGLRSILEQSLIDTMF 386