Pairwise Alignments

Query, 447 a.a., protease HslVU, ATPase component from Pseudomonas putida KT2440

Subject, 425 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 1/104 (0%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELR-AEVTPKNILMIGPTGVGK 62
           TP++I+  L+ ++IGQ  AK+ +++A+ N ++R+   ++    E+   NI+++GPTG GK
Sbjct: 68  TPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHASKNGDVELAKSNIMLVGPTGCGK 127

Query: 63  TEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDLADAA 106
           T +A+ LA++ + PF   +AT  TE GYVG DVE+II  L  AA
Sbjct: 128 TYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAA 171



 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 63/240 (26%)

Query: 237 EELKAKALEAVE------QHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLIEGC 288
           E +  K L+A +      Q GIV+IDE+DK++++ +      DVS EGVQ+ LL ++EG 
Sbjct: 161 ENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGT 220

Query: 289 TVNT-----------KLGMVKTDHILFIASGAFH-LSK---------------------- 314
             +            +   V T +ILFI  GAF  L K                      
Sbjct: 221 VASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAEDD 280

Query: 315 -----------PSDLV-----PELQGRLPIRVELKALTPEDFERILQEPHASLTEQYQAL 358
                      P DLV     PE  GRLP+   L+ L  +   +IL EP  +L +QYQ L
Sbjct: 281 RRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRL 340

Query: 359 LKTEGLNIEFLADGIKRLAEIAYQVNEKTENIGARRLHTLLERLLEEVSFSAGDLASTHD 418
            + E + + F  D ++ +A  A      T   GAR L +++E++L +  F    L    +
Sbjct: 341 FEMEDVELTFHEDALREIARRAI-----TRKTGARGLRSIMEKILLDTMFELPTLEGVRE 395