Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 683 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score = 1025 bits (2651), Expect = 0.0
 Identities = 550/678 (81%), Positives = 605/678 (89%), Gaps = 2/678 (0%)

Query: 9   TATTVSPR--TRSIAQITVLFLILILSIILLFANFAYLNTQSNYDKQYIGHAGELRVLSQ 66
           TATT  P+  +RS +QI VLF+ LI+ I+LLFANFAYLNTQS YDKQYIGHAGELRVLSQ
Sbjct: 3   TATTPKPQAGSRSRSQIVVLFIALIVFIMLLFANFAYLNTQSTYDKQYIGHAGELRVLSQ 62

Query: 67  RIAKNATEAATGKALAFKLLSDARNDFERRWGYLRQGDKSTGLPPAPPAVRDEMESVRRD 126
           RIAKNATEAA GKA AFKLL +ARNDF +RWGYL++GD  TGLP AP AVR EM +V+ D
Sbjct: 63  RIAKNATEAAAGKAAAFKLLGEARNDFAQRWGYLKKGDPQTGLPAAPSAVRAEMRAVQTD 122

Query: 127 WENLRKNTDIILASEQTVLSLHQVAATLAETVPQLQVEYEKVVEILLQSGAPANQVAVAQ 186
           WE L KNTD ILASEQTVLSLHQVAATLAETVPQLQ+E EKVV+ILLQ GAPA+QVA+AQ
Sbjct: 123 WEALLKNTDAILASEQTVLSLHQVAATLAETVPQLQMESEKVVDILLQRGAPASQVALAQ 182

Query: 187 RQLLLAERILGSVNTVLAGDDSAAQAADAFGRDAGRFGQVLEGMINGNATIQVTRVEDAD 246
           RQ LLAERILG+VNTVLAGD++A QAADAFGRDA RFGQVL GM+ GN  +++T+VED D
Sbjct: 183 RQSLLAERILGAVNTVLAGDETAVQAADAFGRDANRFGQVLSGMLQGNPGLRITQVEDRD 242

Query: 247 ARARLAEIAELFQFVAGSVDEILETSPELFRVREAAGNIFSLSQTLLDEASHLANGFENL 306
           ARARL EIAELF+FV+GSVDEILETSP+LF+VR +A NIF+LSQTLL+EASHLA GFENL
Sbjct: 243 ARARLTEIAELFEFVSGSVDEILETSPQLFQVRASASNIFNLSQTLLEEASHLATGFENL 302

Query: 307 AGGRTLDTVGGYVLGLLALASIILIGLVMVRTTNRQLRETAEKNERNQQAIMRLLDEIEE 366
           A GR+ DT+GGYVLGLLAL SIILIGLVMVR TNRQL ETAEKNERNQ AIMRLLDEIE+
Sbjct: 303 ASGRSFDTIGGYVLGLLALTSIILIGLVMVRETNRQLHETAEKNERNQNAIMRLLDEIED 362

Query: 367 LADGDLTVTVSVTEDFTGAIADSINYSVDQLRDLVATINHSAVQVAAAVQDTQNTARQLA 426
           LADGDLTVT SVTEDFTG IADSINYSVDQLRDLVATIN +A QVA AVQDTQ TA  LA
Sbjct: 363 LADGDLTVTASVTEDFTGTIADSINYSVDQLRDLVATINLTAGQVAGAVQDTQATAMHLA 422

Query: 427 KASEHQAAQISEASEAVGDMVESIDRVSAHAYESAKVAERSVAIANKGNEVVHNTINGMD 486
           +ASEHQA QI+EAS A+  M +SID+VSA+A ES+ VAERSV IANKGNEVVHNTI+GMD
Sbjct: 423 QASEHQAQQIAEASTAINQMAQSIDQVSANAAESSAVAERSVEIANKGNEVVHNTIHGMD 482

Query: 487 NIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQASLAGEAGRGFAV 546
           NIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQAS+AG+AGRGFAV
Sbjct: 483 NIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTNILALNAAIQASMAGDAGRGFAV 542

Query: 547 VADEVQRLAERSSSATRQIEALVRTIQADTNEAVISMEQTTAEVVRGARLAQDAGVALAE 606
           VADEVQRLAERSS+ATRQIE LVR IQADTNEAVISMEQTT EVVRGARLAQDAGVAL E
Sbjct: 543 VADEVQRLAERSSAATRQIETLVRAIQADTNEAVISMEQTTTEVVRGARLAQDAGVALEE 602

Query: 607 IEGVSQNLADLIHSISDAAQLQTSSAGQISHTMAVIQQITAQTSAGSGATADSIRHLARM 666
           IEGVS+ LA LI SIS+AAQ QTSSAGQIS TM VIQQIT QTS+GS ATA+SI +LA+M
Sbjct: 603 IEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITTQTSSGSTATAESIGNLAKM 662

Query: 667 ASEMRRSVSGFTLPPPTE 684
           AS++RRSVSGFTLPPP +
Sbjct: 663 ASQLRRSVSGFTLPPPKQ 680