Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 539 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  179 bits (454), Expect = 3e-49
 Identities = 121/414 (29%), Positives = 212/414 (51%), Gaps = 33/414 (7%)

Query: 264 SVDEILETSPELFRVREAAGNIFSLSQTLLDEASHLANGFENLAGGRTLDTVGGYVLGLL 323
           S+D ++     LF  RE A      +Q L DEA        N+ G           L LL
Sbjct: 157 SLDALMAMQGRLFAEREQA------AQVLYDEARR------NMIG-----------LFLL 193

Query: 324 ALASIILIGLVMVRTTNRQLRETAEKNERNQQAIMRLLDEIEELADGDLTVTVSVTEDFT 383
            LA ++   +++ R+  R L    ++  R           +  +A GDLT+ V V     
Sbjct: 194 CLALVVAAAIIVTRSVIRPLGGEPDEAAR----------VLSHIAQGDLTIVVPVGNSAE 243

Query: 384 GAIADSINYSVDQLRDLVATINHSAVQVAAAVQDTQNTARQLAKASEHQAAQISEASEAV 443
           G++  +++     L  +V  I  S   VA++ ++    + Q + + + Q  +I +A+ AV
Sbjct: 244 GSVMRNLHQMQQNLNQMVRHIATSVDGVASSSEELSAVSSQTSSSLQSQGQEIEQAATAV 303

Query: 444 GDMVESIDRVSAHAYESAKVAERSVAIANKGNEVVHNTINGMDNIREQIQDTAKRIKRLG 503
            +M  ++D V+ +A  +++ +  S   A +G   V  T+  ++ +   + +T++RI++L 
Sbjct: 304 NEMTAAVDEVARNAVSTSEASRLSEQTAQRGRAQVQETVASINTLATGVVETSERIQQLA 363

Query: 504 ESSQEIGDIVSLIDDIADQTNILALNAAIQASLAGEAGRGFAVVADEVQRLAERSSSATR 563
              Q+I  ++ +I  IADQTN+LALNAAI+A+ AG+AGRGFAVVADEV+ LA R+ ++T+
Sbjct: 364 GRVQDISSVLEVIRSIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQASTQ 423

Query: 564 QIEALVRTIQADTNEAVISMEQTTAEVVRGARLAQDAGVALAEIEGVSQNLADLIHSISD 623
           +IE ++  I+ DT  AV +M  ++  V     +AQ +G AL EI      + +    I+ 
Sbjct: 424 EIEQMIGNIRQDTEHAVAAMHSSSERVQATLSVAQRSGEALDEITRSISQINERNMMIAS 483

Query: 624 AAQLQTSSAGQISHTMAVIQQITAQTSAGSGATADSIRHLARMASEMRRSVSGF 677
           A + Q   A ++   +  I+ ++ Q   G+  T  +   LA MA  + ++V+ F
Sbjct: 484 ATEEQALVAREVDRNLVGIRNLSQQVLQGALHTETAGHDLAGMAGALHQTVARF 537