Pairwise Alignments

Query, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  183 bits (465), Expect = 2e-50
 Identities = 121/456 (26%), Positives = 234/456 (51%), Gaps = 27/456 (5%)

Query: 225 QVLEGMINGNATIQVTRVEDADARARLAEIAELFQFVAGSVDEILETSPELFRVREAAGN 284
           QVL           + R E     ++  ++ +  + V G ++++ +      R       
Sbjct: 112 QVLFDRFKAEEARYLERQEQVVTLSKANQLEDAIRVVNGEMNQLADEMAATLR------E 165

Query: 285 IFSLSQTLLDEASHLANGFENLAGGRTLDTVGGYVLGLLALASIILIGLVMVRTTNRQLR 344
           + +L++T  ++A+ LA      +  R       +V+G++ L +++ IGL ++ T +  L 
Sbjct: 166 LVTLNKTSANQAASLAQSV--FSQSRI------WVIGMIVLTALVTIGLAVLLTRSIVL- 216

Query: 345 ETAEKNERNQQAIMRLLDEIEELADGDLTVTVSVT-EDFTGAIADSINYSVDQLRDLVAT 403
                       + + L   + +A GDLT  +SV   D    +  ++    + LRD +  
Sbjct: 217 -----------PLAQSLKVAQGVASGDLTGEISVCGRDEPARLQQALKSMQENLRDTIRR 265

Query: 404 INHSAVQVAAAVQDTQNTARQLAKASEHQAAQISEASEAVGDMVESIDRVSAHAYESAKV 463
           I+ S+ Q+A+A ++         +    Q+ +I +A+ AV  M  +++ V+++A  +++ 
Sbjct: 266 ISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTAAVEEVASNAVATSQA 325

Query: 464 AERSVAIANKGNEVVHNTINGMDNIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQT 523
           +  S  IA +G E V  T+  ++ +   + D   +++ L +    I  ++ +I  IA+QT
Sbjct: 326 SRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQKVYGISKVLDVIRSIAEQT 385

Query: 524 NILALNAAIQASLAGEAGRGFAVVADEVQRLAERSSSATRQIEALVRTIQADTNEAVISM 583
           N+LALNAAI+A+ AG+AGRGFAVVADEV+ LA R+  +T++IE ++  IQ  T++AV SM
Sbjct: 386 NLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSM 445

Query: 584 EQTTAEVVRGARLAQDAGVALAEIEGVSQNLADLIHSISDAAQLQTSSAGQISHTMAVIQ 643
           +Q+         +A+ AG AL EI      + +    I+ A++ Q + A ++   +  I+
Sbjct: 446 QQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASASEQQAAVAREVDRNLMNIR 505

Query: 644 QITAQTSAGSGATADSIRHLARMASEMRRSVSGFTL 679
            +  QTS G+  T+ +   L+R+A ++   V+ F++
Sbjct: 506 DLAHQTSTGANQTSAASHDLSRLAVDLNTLVARFSV 541