Pairwise Alignments
Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440
Subject, 890 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5
Score = 269 bits (688), Expect = 9e-76
Identities = 189/616 (30%), Positives = 312/616 (50%), Gaps = 31/616 (5%)
Query: 888 EELLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDL 947
++LL FL E+S+ ++ A L +++ DP ++ ++N+ R +HT+KG + + + L
Sbjct: 2 DDLLREFLTETSESLDVADVELVKFEQDPNNAQILNNIFRLVHTIKGTCGFIGLPRLASL 61
Query: 948 AHELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAATALIDYIRNFS 1007
AH E L + GR P + L+ + DR+ +L V + D I
Sbjct: 62 AHAAETLMDRFREGR-PVTTDAVGLVLSTIDRIKLLLQHVEETEGSEPEGEDRDLISLLE 120
Query: 1008 SAALTDSAAGQGPPEAATAEIPAAAPERA--PGDMVKVDAELLDDLGNLAGEHSIIRGRI 1065
+ A A PP A + PA ER PG++ LD+L RI
Sbjct: 121 AMAEAVDAPAAPPPPAPPPQ-PAQTLERPLLPGELP------LDELD-----------RI 162
Query: 1066 EQQVNDAQFALNEMETTLERMRDQLLRLDVETQGRISSRQQFEGDAYDDFDPLEMDRHSQ 1125
++ + + + D + + + G A
Sbjct: 163 FRETKVDPLPPAPAPAAPPKPAPAMPKADADATHAAAQAGEAHGVAAQSIRV----HVGV 218
Query: 1126 LQQLSRALFESASDLLDLKETLAQRAQEAYSL-LQQQARVNSQLQEGLTATLMVPFERLV 1184
L+QL + E L E + + Y + LQ+ + V +LQE + T M P
Sbjct: 219 LEQLMTMVSELVLTRNQLMEIARRHDEPEYKVSLQRLSNVTGELQEAVMRTRMQPIGNAW 278
Query: 1185 PRLQRVVRQVASELGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESRAMRL 1244
+L R+VR +A ELGKQ+EL A+ ELDR VL+++ PL HM+RN+ DHGLE R
Sbjct: 279 QKLPRIVRDLAQELGKQIELEQVGADTELDRQVLDQIKDPLTHMVRNSADHGLEMPEQRR 338
Query: 1245 AAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGLLDPQ--AQLSDHEI 1302
AAGK E+G I L+ HEG +++E++DDG G+ + +++KA++ GL A++ D ++
Sbjct: 339 AAGKSERGLIRLSAYHEGGHVIVEISDDGRGLDVARIKQKALENGLATEAELAKMPDSQV 398
Query: 1303 LQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVS 1362
+FI GFSTA+K+T +SGRG+GMDVV ++ +GG++ + S QG+G+ F+I++P T++
Sbjct: 399 FRFIFHAGFSTAQKVTNVSGRGVGMDVVRSNLESIGGTVDVRSRQGEGSTFVIKIPLTLA 458
Query: 1363 INRALMVHLGEEQYAIPLNTIEGIVRVPP-AELAACYQLDSPRYVYAGHEYELRYLGELL 1421
I AL+V E++A+P + +E +VRV ++ + +SP + LG LL
Sbjct: 459 IVPALIVRAAGERFALPQSAVEELVRVQAGSDHEITWLNNSPVLGLRDRLLPIVSLGALL 518
Query: 1422 QGLPRPALLGQSVPLPVLLVHSK--EQSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGA 1479
P +++ L+V K Q+F + +++S + EIVVK + + +SG+
Sbjct: 519 GLSPERDGRDEALWERALIVVMKVGHQTFGVVVEAVSHTEEIVVKPMASALRQLPMVSGS 578
Query: 1480 TLLGDGRVVLILDLLG 1495
T+LGDGRV++ILD G
Sbjct: 579 TILGDGRVIMILDPAG 594
Score = 58.2 bits (139), Expect = 4e-12
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 1514 RQLLGPAPRRALLVMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDAMALL-EEHRPDVL 1572
R L+ + R LL+ VD+S R + + +L +G V G +A+A L E D +
Sbjct: 757 RHLVRSSERPRLLL--VDESPFHRDLLAPMLNGNGYEVTACASGGEALARLGTEDGFDAI 814
Query: 1573 LLDIEMPRMDGFEVATRIRRDARLKDLPIIMITSRTGQKHRDRAMAIGVNEYLGK 1627
+ D+++P MDGF +A +R D R++++PII + + + +R A+G + + K
Sbjct: 815 VSDVDLPDMDGFALAAAVRGDPRIREVPIIALATAQDRDALERGRAVGFTDCVAK 869
Score = 47.0 bits (110), Expect = 1e-08
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 439 DELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAEL 498
D+L + FL E E L + +++ D + L + R +HT+KG+ + +A L
Sbjct: 2 DDLLREFLTETSESLDVADVELVKFEQDPNNAQILNNIFRLVHTIKGTCGFIGLPRLASL 61
Query: 499 AWGAEHLLNRVLEGRSVLSPE-GVVALQQVFVHLPDLLADFAAGQLPQLTEIEQLAGHLH 557
A AE L++R EGR V + G+V + L + G P+ E L L
Sbjct: 62 AHAAETLMDRFREGRPVTTDAVGLVLSTIDRIKLLLQHVEETEGSEPE-GEDRDLISLLE 120
Query: 558 SLAEN-DAPAAAGVDGLDPQ 576
++AE DAPAA PQ
Sbjct: 121 AMAEAVDAPAAPPPPAPPPQ 140
Score = 32.7 bits (73), Expect = 2e-04
Identities = 55/252 (21%), Positives = 87/252 (34%), Gaps = 35/252 (13%)
Query: 717 LVASFLAHAMDILLDAETLLSRWQQQPGQRDALDNLLDQMTTLGHAAHLADLWQMDDVCE 776
L+ FL + L A+ L +++Q P L+N+ + T+ L ++ +
Sbjct: 4 LLREFLTETSESLDVADVELVKFEQDPNNAQILNNIFRLVHTIKGTCGFIGLPRLASLAH 63
Query: 777 ALLDLYGAVEEG---SLPADARFFSQAQRAHEALLDMLDEVAAGQDIPPRPELVDRLRNL 833
A L EG + A S R + LL ++E + PE DR
Sbjct: 64 AAETLMDRFREGRPVTTDAVGLVLSTIDRI-KLLLQHVEETEGSE-----PEGEDR---- 113
Query: 834 LDQALAPDATGLVGIDTVTPLHPDMDLSDTLGLPRPPLQPQVAEPLAEEPESPGE----E 889
D ++ L + D P PP P E P PGE E
Sbjct: 114 ---------------DLISLLEAMAEAVDAPAAPPPPAPPPQPAQTLERPLLPGELPLDE 158
Query: 890 LLEVFLEESSDIVESAAAALARWQ---ADPRSSVEVDNLMRDLHTLKGVARMVEITPIGD 946
L +F E D + A A A + A P++ + + GVA +G
Sbjct: 159 LDRIFRETKVDPLPPAPAPAAPPKPAPAMPKADADATHAAAQAGEAHGVAAQSIRVHVGV 218
Query: 947 LAHELEFLYELL 958
L + + EL+
Sbjct: 219 LEQLMTMVSELV 230
Score = 30.0 bits (66), Expect = 0.001
Identities = 83/379 (21%), Positives = 149/379 (39%), Gaps = 57/379 (15%)
Query: 79 ARALADGQVSPRGDCLGALFRGLEQLPSYLERLRGARHDLPLVMLPLLNQLRACRGEEPL 138
A A A + G+ G + + LE+L +L L L+ R R +EP
Sbjct: 190 ADADATHAAAQAGEAHGVAAQSIRVHVGVLEQLMTMVSELVLTRNQLMEIAR--RHDEPE 247
Query: 139 AQASLMTGAAQRFAGDDDLANL--DLSLGNWRDQLQA-GSGRDALRSVVTALCDDLMRIK 195
+ SL L+N+ +L R ++Q G+ L +V L +L +
Sbjct: 248 YKVSLQR-----------LSNVTGELQEAVMRTRMQPIGNAWQKLPRIVRDLAQELGKQI 296
Query: 196 ERLDQFGRGDRQHREQLDALLAPLRHVADTLAVLGFQQP--RRVIIDQ---VLALQALAQ 250
E L+Q G R+ LD + PL H+ A G + P RR ++ L A +
Sbjct: 297 E-LEQVGADTELDRQVLDQIKDPLTHMVRNSADHGLEMPEQRRAAGKSERGLIRLSAYHE 355
Query: 251 GERAV----DDAVLMDVAGALLYVEASLNGMVGPLEENGQGSLPGSDLAEIRQLVLNESL 306
G + DD +DV A + +A NG+ E +P S ++ + + +
Sbjct: 356 GGHVIVEISDDGRGLDV--ARIKQKALENGLATEAE---LAKMPDS---QVFRFIFHAGF 407
Query: 307 NVLQQAKDLIGDYLESDWPRQRLQPLPGLL----QQIRGALAMLMLP----AVAELFVGC 358
+ Q+ ++ G + D R L+ + G + +Q G+ ++ +P V L V
Sbjct: 408 STAQKVTNVSGRGVGMDVVRSNLESIGGTVDVRSRQGEGSTFVIKIPLTLAIVPALIVRA 467
Query: 359 ASYVQRWLQHLEEEPPIDELTHLAEALSAAECYLQWRAADPLADGQPFIEMARASLAALG 418
A +R+ P + L + ++ + W P+ + + + SL AL
Sbjct: 468 AG--ERFAL------PQSAVEELVRVQAGSDHEITWLNNSPVLGLRDRL-LPIVSLGAL- 517
Query: 419 VQCVVVGASPDQDGNGDGI 437
+G SP++DG + +
Sbjct: 518 -----LGLSPERDGRDEAL 531
Score = 27.3 bits (59), Expect = 0.008
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 589 LASLEVYLQSTGGHDTPVSDDLQRALHTLKGSAAMAGVMPVAELATAFDRLAREYK 644
+A +E+ ++ + +++ R +HT+KG+ G+ +A LA A + L ++
Sbjct: 18 VADVELVKFEQDPNNAQILNNIFRLVHTIKGTCGFIGLPRLASLAHAAETLMDRFR 73