Pairwise Alignments

Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

Subject, 754 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

 Score =  325 bits (834), Expect = 9e-93
 Identities = 239/758 (31%), Positives = 386/758 (50%), Gaps = 32/758 (4%)

Query: 890  LLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAH 949
            LLE+F  E+    +  +A L   + +P  + +++  MR  H+LKG AR+V +     ++H
Sbjct: 11   LLELFSLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSVSH 70

Query: 950  ELEFLYELLAAGRLPPSAP-LFALLQNCHDRLAHMLDAVRLGQP-LHAATALIDYIRNFS 1007
             +E         RL      + ALLQ     +        +G   + A  AL++ + + S
Sbjct: 71   VMEDCLVSAQESRLYLQPEHIDALLQGTDLLMRIATPGNNVGPADIEAYVALMERLLDPS 130

Query: 1008 SAALTDSAAGQGPPEAATAEIPAAAPERAPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQ 1067
             A +      + PP      + A  PE  P   V  +    +      GE  ++R   E+
Sbjct: 131  QAPV------KAPPPEPVPVVEALPPEPEPAPPVVAEPPRHNKRMTEGGER-VLRVTAER 183

Query: 1068 QVNDAQFALNEMETTLERMRDQLLRLDVETQGRISSRQQFEGDAYDDFDPLEMDRHSQLQ 1127
              +    +   +  T +R++  L  L      R+   Q     A D  D      +  L+
Sbjct: 184  LNSLLDLSSKSLVET-QRLKPYLASLQ-----RLKRIQSQSVRALDTLDGQLKTENLNLE 237

Query: 1128 QLSRALFESASDLLDLKETLAQRAQEAYSLLQQQARVNSQLQEGLTATLMVPFERLVPRL 1187
                AL ++   L + +  LA++  E      Q  +    L +   A  M PF  ++   
Sbjct: 238  A-QEALADTRRLLSEAQALLAEKTAELDEFGWQAGQRAQVLYDTALACRMRPFADVLAGQ 296

Query: 1188 QRVVRQVASELGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAG 1247
             R+VR +   LGKQV L +   + ++DR VLE++ APL H+LRNAVDHG+E    RL AG
Sbjct: 297  VRMVRDLGRSLGKQVRLEIEGDKTQVDRDVLEKLEAPLTHLLRNAVDHGIEMPEQRLLAG 356

Query: 1248 KPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGL--LDPQAQLSDHEILQF 1305
            KP +G I L   H+   +V+E++DDG GV LE +R   + R L  L+   +LS+ E+L F
Sbjct: 357  KPAEGLIRLRASHQAGLLVLELSDDGNGVDLERLRGTIVDRHLSPLETAQRLSEEELLTF 416

Query: 1306 ILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINR 1365
            +  PGFS  +K+T++SGRG+G+D V   V+QL G++ +E   G+G+RF + +P T+S+ R
Sbjct: 417  LFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGQGSRFHLEVPLTLSVVR 476

Query: 1366 ALMVHLGEEQYAIPLNTIEGIVRVPPAELAACYQLDSPRYVYAGHEYELRYLGELL--QG 1423
            +L+V +GEE YA PL  IE +  + P ++    QL+  ++ +    +E R++G +   Q 
Sbjct: 477  SLVVEVGEEAYAFPLAHIERMCDLAPDDIV---QLEGRQHFW----HEGRHVGLVAASQL 529

Query: 1424 LPRPALLGQSVPLPVLLVHSKEQSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLLG 1483
            L RP     S  L V+++  ++  + I  +     R +VV  L  +   V  +S   LL 
Sbjct: 530  LQRPTGQNPSDTLKVVVIRERDAVYGIAVERFIGERTLVVLPLDDRLGKVQDISAGALLD 589

Query: 1484 DGRVVLILDLLGQLRGQQRRL--ARLPGGGSQRQLLGPAPRRALLVMVVDDSVTVRKVTS 1541
            DG VVLI+D+   LR   + L   RL     + Q    APR+   V+VVDDS+TVR++  
Sbjct: 590  DGSVVLIVDVEDMLRSVDKLLNTGRLERIARRSQQSTEAPRKR--VLVVDDSLTVRELQR 647

Query: 1542 RLLERHGMSVLTAKDGVDAMALLEEHRPDVLLLDIEMPRMDGFEVATRIRRDARLKDLPI 1601
            +LL   G  V  A DG+D    L     D+L+ DI+MPRMDG E+ T +RRD+RL+ LP+
Sbjct: 648  KLLLNRGYEVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVTLLRRDSRLQSLPV 707

Query: 1602 IMITSRTGQKHRDRAMAIGVNEYLGK-PYQESLLLQSI 1638
            ++++ +  ++ R R +  G + YL K  + +  LL ++
Sbjct: 708  MVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAV 745



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 438 DDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAE 497
           D  L ++F  EA      +    L    +  Q + L    RA H+LKG+ R+V  +A   
Sbjct: 8   DASLLELFSLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVS 67

Query: 498 LAWGAEHLLNRVLEGRSVLSPEGVVALQQ 526
           ++   E  L    E R  L PE + AL Q
Sbjct: 68  VSHVMEDCLVSAQESRLYLQPEHIDALLQ 96



 Score = 26.9 bits (58), Expect = 0.009
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 574 DPQLLGIFRSEAQGHLASLEVYLQSTGGHDTPVSDDLQ---RALHTLKGSAAMAGV 626
           D  LL +F  EA      L   L +   + T  +D L+   RA H+LKG+A + GV
Sbjct: 8   DASLLELFSLEADAQTQVLSAGLLALERNPTQ-ADQLEACMRAAHSLKGAARIVGV 62