Pairwise Alignments

Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

Subject, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

 Score =  218 bits (555), Expect = 2e-60
 Identities = 133/383 (34%), Positives = 216/383 (56%), Gaps = 22/383 (5%)

Query: 1129 LSRALFESASDLLDLKETLAQRAQEAYSLLQQQARVNSQLQEGLTATLMVPFERLVPRLQ 1188
            +++++   A+ +LD      +R       L++ AR    LQE + +  M+P + +  R  
Sbjct: 315  ITQSMLTQAATMLD--PVAYERFLSGLGHLERNAR---DLQESVMSIRMMPMDYVFSRFP 369

Query: 1189 RVVRQVASELGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGK 1248
            RV+R V+++LGKQV L     E ELD+ ++ER+V PL H++RN++DHG+E+  +RLA GK
Sbjct: 370  RVIRDVSAKLGKQVRLDTYGKETELDKGLIERIVDPLTHLVRNSLDHGIETPDVRLAKGK 429

Query: 1249 PEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGLLDPQAQLSDHEILQFILR 1308
               G + L+  H G +IVIE++DDGAG+  E +  KA+++G L     + D E+ Q I  
Sbjct: 430  DATGQLLLSAQHHGGNIVIEVSDDGAGLNRERILAKALQQG-LPVSETMPDEEVWQLIFA 488

Query: 1309 PGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALM 1368
            PGFSTAE++T ISGRG+GMDVV   ++++GG + I S  G+G    I LP T++I   + 
Sbjct: 489  PGFSTAEQVTDISGRGVGMDVVKRNIQEMGGHVEIHSRGGQGTTTRIVLPLTLAILNGMS 548

Query: 1369 VHLGEEQYAIPLNTIEGIVRVPPAELAACYQLDSPRYVYAGHEYELRYLGELLQGLPRPA 1428
            V +G+E Y +PL+ +   ++  P  L          +      + +R  GE L  +    
Sbjct: 549  VKVGDEAYILPLSYVIESLQPLPEHL----------HSITADGHVIRVRGEYLPLIELHR 598

Query: 1429 LL----GQSVPLP--VLLVHSKEQSFAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLL 1482
            +      Q+ P    +++V + +  FA+  D L    ++VVK+L   +  V G+S AT+L
Sbjct: 599  VFDVAGAQTHPTQGILVIVQADDSRFALLVDELLGQHQVVVKNLETNYRKVPGISAATIL 658

Query: 1483 GDGRVVLILDLLGQLRGQQRRLA 1505
            GDG V  I+D+    R Q+ + A
Sbjct: 659  GDGSVAFIIDVGAMPRIQRAQAA 681



 Score = 46.6 bits (109), Expect = 1e-08
 Identities = 35/121 (28%), Positives = 52/121 (42%)

Query: 440 ELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELA 499
           +  Q F  EA ELL E+E+  L    +    E L  + RA H++KG        A+    
Sbjct: 5   QFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTALTNTT 64

Query: 500 WGAEHLLNRVLEGRSVLSPEGVVALQQVFVHLPDLLADFAAGQLPQLTEIEQLAGHLHSL 559
              E LL+R   G+  L+   + A  +    L + L  + AGQ P    +  + G L  L
Sbjct: 65  HVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGVLQQL 124

Query: 560 A 560
           A
Sbjct: 125 A 125



 Score = 40.4 bits (93), Expect = 7e-07
 Identities = 74/352 (21%), Positives = 122/352 (34%), Gaps = 34/352 (9%)

Query: 716  QLVASFLAHAMDILLDAETLLSRWQQQPGQRDALDNLLDQMTTLGHAAHLADLWQMDDVC 775
            Q   +F   A+++L + E LL     +    + L+ +     ++   A       + +  
Sbjct: 5    QFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTALTNTT 64

Query: 776  EALLDLYGAVEEGSLPADARFFSQAQRAHEALLDMLDEVAAGQDIPPRPELVDRLRNLLD 835
              L  L      G L  + R         +AL + L    AGQ+  P P++V  +  +L 
Sbjct: 65   HVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQE--PNPDMVAHICGVLQ 122

Query: 836  QALAPDATGLVGIDTVTPLHPDMDLSDTLGLPRPPLQPQVAEPLAEEPESPGEELLEVFL 895
            Q LA ++    G +++         +  +  P P   P  A   AE     G+ +L +  
Sbjct: 123  Q-LALES----GDESLAAHAAATAAAAPVAAPAPA--PVAAAAPAEAAVPAGDGVLRIRF 175

Query: 896  EESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAHELEFLY 955
               SD                    E D L  +L  L    +++  T   D   +L  L 
Sbjct: 176  ARLSDS-------------------ECDLLAGELSNL---GKVLSRTRSND---QLTVLL 210

Query: 956  ELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAATALIDYIRNFSSAALTDSA 1015
            E         +   F + ++  D       AV   +P   A A     +  +  A     
Sbjct: 211  ETTCDPDDIVAVCCFVIDESQIDITREAAAAVVAPEPAAPAPAAEAPAKAPAVVAAAAPV 270

Query: 1016 AGQGPPEAATAEIPAAAPERAPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQ 1067
            A   P   A    PAAA        ++VD E +D L NL GE  I +  + Q
Sbjct: 271  AQAAPAAPAATAAPAAAAGTKESSSIRVDVEKVDQLINLVGELVITQSMLTQ 322



 Score = 28.5 bits (62), Expect = 0.003
 Identities = 28/129 (21%), Positives = 44/129 (34%), Gaps = 3/129 (2%)

Query: 23  LDCLGQARQALERFAGETGDLSMMAFVVDNLHQVHGCLRMLELRGATRLAEELELFARAL 82
           ++ L +  Q L     E  D   +  +    H + G          T     LE      
Sbjct: 15  IELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTALTNTTHVLETLLDRA 74

Query: 83  ADGQVSPRGDCLGALFRGLEQLPSYLERLRGARH---DLPLVMLPLLNQLRACRGEEPLA 139
             GQ+S  G  + A     + L   L   +  +    D+   +  +L QL    G+E LA
Sbjct: 75  RHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGVLQQLALESGDESLA 134

Query: 140 QASLMTGAA 148
             +  T AA
Sbjct: 135 AHAAATAAA 143



 Score = 28.1 bits (61), Expect = 0.004
 Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 28/202 (13%)

Query: 197 RLDQFGRGDRQHREQLDALLAPLRHVADTLAVLGFQQPRRVIIDQVLALQALAQGERAVD 256
           RLD +G+     +  ++ ++ PL H+       G + P             LA+G+ A  
Sbjct: 384 RLDTYGKETELDKGLIERIVDPLTHLVRNSLDHGIETPD----------VRLAKGKDATG 433

Query: 257 DAVL-MDVAGALLYVEASLNG----MVGPLEENGQGSLPGSDL---AEIRQLVLNESLNV 308
             +L     G  + +E S +G        L +  Q  LP S+     E+ QL+     + 
Sbjct: 434 QLLLSAQHHGGNIVIEVSDDGAGLNRERILAKALQQGLPVSETMPDEEVWQLIFAPGFST 493

Query: 309 LQQAKDLIGDYLESDWPRQRLQPLPGLLQ----QIRGALAMLMLPAVAELF------VGC 358
            +Q  D+ G  +  D  ++ +Q + G ++      +G    ++LP    +       VG 
Sbjct: 494 AEQVTDISGRGVGMDVVKRNIQEMGGHVEIHSRGGQGTTTRIVLPLTLAILNGMSVKVGD 553

Query: 359 ASYVQRWLQHLEEEPPIDELTH 380
            +Y+      +E   P+ E  H
Sbjct: 554 EAYILPLSYVIESLQPLPEHLH 575