Pairwise Alignments
Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440
Subject, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Score = 458 bits (1178), Expect = e-132
Identities = 292/812 (35%), Positives = 432/812 (53%), Gaps = 60/812 (7%)
Query: 889 ELLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLA 948
+L +F EE+++++ +L +W P S ++R LHTLKG AR+ +G+ A
Sbjct: 1258 DLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERA 1317
Query: 949 HELEFLYELLAA------------GRLPPSAPLFALLQNCHD----RLAHMLDAVRLGQP 992
H +E ELL + GRL F L+ D LA ++ + P
Sbjct: 1318 HRMESEIELLGSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAP 1377
Query: 993 LHAATALIDYIRNFSSAALTDSAAG-QGPPEAATAE-IPAAAPERAPG------------ 1038
A L+ A +SAA G + TA+ I AAAP A
Sbjct: 1378 ---AAQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAP 1434
Query: 1039 ------DMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQFALNEMETTLERMRDQLLR 1092
V++ +LLD L GE I R R+E ++ + +L ++ L+R+R QL
Sbjct: 1435 LRAVSSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRLRQQLRD 1494
Query: 1093 LDVETQGRISSRQQFEGDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRAQ 1152
++V+ + ++ SR D+ FDPLE DR +++Q+L+R + ES +D+ ++ TL + Q
Sbjct: 1495 IEVQAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQKTVQ 1554
Query: 1153 EAYSLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEGE 1212
L QAR +LQ GL T MV FE + RL RVVRQ + + GKQV L + E
Sbjct: 1555 ATEDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIE 1614
Query: 1213 LDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDD 1272
+DR VL+RM EH+LRN V HG+E A R AGK G I ++L HEG D+ + DD
Sbjct: 1615 MDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDD 1674
Query: 1273 GAGVPLEAVRRKAIKRGLLDPQAQLSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHE 1332
GAG+ + + +A GL+ +LS E + I +PGFSTA ++++++GRG+GMDVV
Sbjct: 1675 GAGLDRKRIAERARVLGLIGADQELSAEEATELIFKPGFSTAGQVSELAGRGIGMDVVRA 1734
Query: 1333 EVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPA 1392
++ LGG + S G+G F + LP T ++ +M+ GE +P N +E + RV
Sbjct: 1735 QIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVELVQRVSGT 1794
Query: 1393 ELAACYQLDSPRYVYAGHEYELRYLGELLQGLPRPALLGQSVPLPVLLVHSKEQSFAIQA 1452
+L A Y +S + + + + G LLQ R + + +++V S Q A+
Sbjct: 1795 DLDAAYLHNS--HPFGSEQVPFYWAGALLQASTR-SEHAAAKNNTLVVVRSAAQRVALHV 1851
Query: 1453 DSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILD--LLGQLRGQQRR------L 1504
D + ++E+VVK+LGPQ A + GL+G ++L G V LI + L + G+Q R L
Sbjct: 1852 DEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQARERQAAAL 1911
Query: 1505 ARLP----------GGGSQRQLLGPAPRRALLVMVVDDSVTVRKVTSRLLERHGMSVLTA 1554
A P G + +L P + LV+VVDDS+TVR+VT RLL+R G V A
Sbjct: 1912 AAAPARAAAAEAEQGVPQEPVVLAPVTPQIPLVLVVDDSITVRRVTQRLLQREGYRVSLA 1971
Query: 1555 KDGVDAMALLEEHRPDVLLLDIEMPRMDGFEVATRIRRDARLKDLPIIMITSRTGQKHRD 1614
DG+ A+ L++ RP V+L DIEMPRMDGF++A IR D+ L +LPIIMITSR +KHRD
Sbjct: 1972 ADGLQALERLQQERPAVVLSDIEMPRMDGFDLARNIRADSALAELPIIMITSRIAEKHRD 2031
Query: 1615 RAMAIGVNEYLGKPYQESLLLQSIAHWSQAHA 1646
A +GVN YLGKPY E LL+ + ++ A
Sbjct: 2032 YARTLGVNHYLGKPYSEEELLRLVRAYTSEPA 2063
Score = 65.1 bits (157), Expect = 8e-14
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 11/234 (4%)
Query: 812 DEVAAGQDIPPRPELVDRLRNLLDQALAPDATGLVGIDTVTPLHPDMDLSDTLGLPRPPL 871
D AAGQ P E V + + D +A L + + P + S+ +
Sbjct: 591 DGAAAGQ--APAAEAVLSIEEV-DAQIASKLAALATPNRKAKVSPIEEFSNKADSWTNKI 647
Query: 872 QPQVAEPLAEEPESPGEELLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHT 931
A P E E ++L +FL+E+ ++V++ A+A + P + E+ L R HT
Sbjct: 648 AGPSALPDTEVTELEEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHT 707
Query: 932 LKGVARMVEITPIGDLAHELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQ 991
LKG +RMV +T GD A LE + A + + L + + + ++A+ GQ
Sbjct: 708 LKGSSRMVGLTEFGDAAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQ 767
Query: 992 PLHAATALIDYIRNFSSAA--------LTDSAAGQGPPEAATAEIPAAAPERAP 1037
P A + N A + D+ A AE P AAP AP
Sbjct: 768 PHSWQAASFSRVANALLAGEPVPPPVRVADAEALAVAARHIAAETPVAAPAVAP 821
Score = 56.6 bits (135), Expect = 3e-11
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 438 DDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAE 497
+D+L+ +FLDEA E++ + E L +RRA HTLKGS RMV +
Sbjct: 663 EDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFGD 722
Query: 498 LAWGAEHLLNRVLEGRSVLSPEGVVALQQVFVHLPDLLADFAAGQ 542
AW E +LN L + +PE + ++ + + AAGQ
Sbjct: 723 AAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQ 767
Score = 50.4 bits (119), Expect = 2e-09
Identities = 80/296 (27%), Positives = 116/296 (39%), Gaps = 46/296 (15%)
Query: 441 LRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELAW 500
L V+L+EA E ++ W ++ +R V A H+L GS V +++ +A
Sbjct: 1096 LYNVYLNEADEWSRQLATDVGEWALESHERLPDSTVALA-HSLAGSSATVGFHSLSGMAR 1154
Query: 501 GAEHLLNRVLEGRSVLSPEGVVALQQVFVHLPDLLADFAAGQL----------------- 543
E L + S +G+V L L LL FA G L
Sbjct: 1155 LFESALQHLQMQGSGSREQGMV-LVAAADELRRLLHQFAVGFLRDPAEGTLQALRDIANS 1213
Query: 544 PQLTEIEQLAGH--LHSLAENDAPAAAGVD----------GLDPQLLGIFRSEAQGHLAS 591
P TEI A L + +D+ A +D +D L IF EA L
Sbjct: 1214 PMPTEIAMRAEARPLQQVVSSDSIADVALDDSEDAIDLADAVDVDLFPIFEEEAAELLPQ 1273
Query: 592 LEVYLQSTGGH--DTPVSDDLQRALHTLKGSAAMAGVMPVAELA------------TAFD 637
L L+ H D+ + R LHTLKGSA +AG M + E A +
Sbjct: 1274 LGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERAHRMESEIELLGSQGAE 1333
Query: 638 RLAREYKGHQLPLQMAEMEWLEAARSLFHLGLAQLDSTPLAAIPGAAELIEQVGQA 693
R E +L A + L AA + LAQL ++ A+ P AA+L++ +A
Sbjct: 1334 RADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAP-AAQLVQVAPEA 1388
Score = 47.4 bits (111), Expect = 2e-08
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 422 VVVGASPDQDGNGDGIDDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALH 481
V + S D D +D +L +F +EA ELLP++ +W V R LH
Sbjct: 1240 VALDDSEDAIDLADAVDVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLH 1299
Query: 482 TLKGSGRMVHAEAVAELAWGAEHLLNRV-LEGRSVLSPEGVV----ALQQVF-------- 528
TLKGS R+ A + E A E + + +G E ++ ALQ F
Sbjct: 1300 TLKGSARLAGAMRLGERAHRMESEIELLGSQGAERADIEKLLGRLDALQATFDALRAADD 1359
Query: 529 ---VHLPDLLAD-FAAGQLPQLTEIEQLAGHLHSLAENDAPAAAGVDG 572
V L L+A A+ QL ++ AG + + E+ AP A DG
Sbjct: 1360 ATQVELAQLVASASASAPAAQLVQVAPEAG-VPANDESAAPVAGDEDG 1406
Score = 33.1 bits (74), Expect = 3e-04
Identities = 112/505 (22%), Positives = 185/505 (36%), Gaps = 133/505 (26%)
Query: 198 LDQFGRGD----RQHREQLDAL-----------LAPLRHVADTLAVLGFQ----QPRRVI 238
++QFGR D Q R++++ ++ R VADT A LG P +
Sbjct: 312 VEQFGRFDPLVLSQARKRIETAKEMWSALSGGDVSRTRQVADTFANLGESLQKLHPPSLP 371
Query: 239 IDQVL--ALQALAQGERAVDDAVLMDVAGALLYVEASLNG--------------MVGPLE 282
+ Q L A++A + + D + M+VA ++LY+EA+L + G +E
Sbjct: 372 MVQALTHAVEASLRSGQPPDTELAMEVATSVLYLEAALEDLDPSDPQLTARTLQLAGRIE 431
Query: 283 --ENGQGSLP----GSDL------AEIRQLVLNESLNVLQQAKDLIGDYLESDWPRQRLQ 330
+ G S P DL + V++E + L + + + Y + L+
Sbjct: 432 RVQGGGHSEPLEPWMEDLYRRVSDRQTMGTVVDELRSHLSELEKSLDQYFRRPAEKGLLR 491
Query: 331 PLPGLLQQIRGALAMLMLPAVAELFVGCASYVQRWLQHLEEEPPIDELTHLAEALSAAEC 390
+P L Q+RG ++L L A VQR +E
Sbjct: 492 TVPTQLMQMRGVFSVLGLDQAAHT-------VQRMRDDVEA------------------- 525
Query: 391 YLQWRAADPLADGQPFIEMARASLAALGVQCVVVGASPDQDGNGDGIDDELRQVFLDEAG 450
L P EM A ALG +G D G + L VF EAG
Sbjct: 526 --------MLVSTSPAEEM--AGFDALGNNLGALGFLIDMLGYQPALAKRL-FVFDAEAG 574
Query: 451 ELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELAWGAEHLLNRVL 510
EL P + R D+ + +G+ AEA
Sbjct: 575 ELKPLMGRQ----ATDSSAADG-----------AAAGQAPAAEA---------------- 603
Query: 511 EGRSVLSPEGVVALQQVFVHLPDLLADFAA-GQLPQLTEIEQLAGHLHSLAENDAPAAAG 569
V+++++V + LA A + +++ IE+ + S A +A
Sbjct: 604 ----------VLSIEEVDAQIASKLAALATPNRKAKVSPIEEFSNKADSWTNKIAGPSAL 653
Query: 570 VDG-----LDPQLLGIFRSEAQGHLAS-LEVYLQ-STGGHDTPVSDDLQRALHTLKGSAA 622
D + L IF EA+ + + LE + ++ DT L+RA HTLKGS+
Sbjct: 654 PDTEVTELEEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSR 713
Query: 623 MAGVMPVAELATAFDRLAREYKGHQ 647
M G+ + A + +++ + Q
Sbjct: 714 MVGLTEFGDAAWSLEQVLNTWLADQ 738