Pairwise Alignments

Query, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

Subject, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  336 bits (861), Expect = 7e-96
 Identities = 242/772 (31%), Positives = 386/772 (50%), Gaps = 52/772 (6%)

Query: 890  LLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAH 949
            LLE+F  E+    +   A L   + +P  + +++  MR  H+LKG AR+V +     +AH
Sbjct: 11   LLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSVAH 70

Query: 950  ELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAATALIDYIRNFSSA 1009
             +E        GRL  +A     L    D L      +R+  P  A       +     A
Sbjct: 71   VMEDCLVAAQEGRLRLTAEHIDALLQGTDLL------MRIATPGDAGAQATLPVFLAQMA 124

Query: 1010 ALTDSAAGQGPPEAATAEIPAAA-----PERAPGDMVKVDAE--LLDDLGNLAGEHSIIR 1062
            +L D  A   P     A +P  A     P   P +  + + E  L    G  AGE     
Sbjct: 125  SLLDPGASAMPVVPPAASVPPLATLPPAPMVMPAEPPEPEPEPALRRKAGKRAGE----- 179

Query: 1063 GRIEQQVNDAQFALNEMETTLERMRDQLLRLDVETQ------GRISSRQQFEGDAYDDFD 1116
                     A+  L      L  + D   +  VETQ        +   ++  G      D
Sbjct: 180  --------GAERVLRVTADRLNSLLDLSSKSLVETQRLKPYLATLQRLKRMHGQGMQALD 231

Query: 1117 PLEMDRHS--QLQQLSRALFESASDLLDLKETLAQRAQEAYSLLQQQARVNSQLQEGLTA 1174
             L M      Q  ++  AL ++   L + +  L Q+A +      Q ++    L +   A
Sbjct: 232  GLRMQLEDTGQGNEVLEALAQTQRLLAETQRILQQQAADLDEFGWQASQRAQLLYDTALA 291

Query: 1175 TLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVD 1234
              M PF  ++    R+VR +   LGK V LVV   + ++DR VLE++ APL H+LRNAVD
Sbjct: 292  CRMRPFADVLTGQSRMVRDLGRSLGKPVRLVVEGEKTQVDRDVLEKLEAPLTHLLRNAVD 351

Query: 1235 HGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGL--LD 1292
            HG+E    RL AGKP++G I L   H+   + +E+ DDGAG+ LE +R   ++R L   D
Sbjct: 352  HGIELPERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSSIVERALSPAD 411

Query: 1293 PQAQLSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGAR 1352
              A++S+ E+L F+  PGFS  +K+T++SGRG+G+D V   +++L GS+ +    G+G R
Sbjct: 412  TVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIELTQVAGQGCR 471

Query: 1353 FLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPAELAACYQLDSPRYVYAGHEY 1412
            F +++P T+S+ R+L+V +G E YA PL  IE  + V   ++    Q++  ++ +    +
Sbjct: 472  FHLQVPLTLSVVRSLVVEVGGEAYAFPLAHIERTLEVTAEQIV---QIEGRQHFW----H 524

Query: 1413 ELRYLGELL--QGLPRPALLGQSVPLPVLLVHSKEQSFAIQADSLSPSREIVVKSLGPQF 1470
            E R++G +   Q L RPA       L V+++  +EQ + +  + L   R +VV  L P+ 
Sbjct: 525  EGRHIGLVAASQLLNRPAGQSDEASLRVVVIREREQLYGVAVERLVGERVLVVMPLDPRL 584

Query: 1471 AAVAGLSGATLLGDGRVVLILDLLGQLRGQQRRLARLPGGGSQRQLLGPAPRRALL---V 1527
              V  +S   LL DG VVLI+D+   LR  ++ L+    G  +R   G +  R ++   +
Sbjct: 585  GKVQDISSGALLDDGSVVLIVDVEDLLRSLEKLLST---GSLERIERGSSGARGVVRKRI 641

Query: 1528 MVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDAMALLEEHRPDVLLLDIEMPRMDGFEVA 1587
            +VVDDS+TVR++  +LL   G  V  A DG+D    L     D+L+ DI+MPRMDG E+ 
Sbjct: 642  LVVDDSLTVRELQRKLLGNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELV 701

Query: 1588 TRIRRDARLKDLPIIMITSRTGQKHRDRAMAIGVNEYLGK-PYQESLLLQSI 1638
            T +RRD RL+ LP+++++ +  ++ R R +  G + YL K  + +  LL ++
Sbjct: 702  TLVRRDQRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAV 753



 Score = 35.0 bits (79), Expect = 3e-05
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 438 DDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAE 497
           D  L ++F  EA      +    +    +  Q + L    RA H+LKG+ R+V  +A   
Sbjct: 8   DASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVS 67

Query: 498 LAWGAEHLLNRVLEGRSVLSPEGVVALQQ 526
           +A   E  L    EGR  L+ E + AL Q
Sbjct: 68  VAHVMEDCLVAAQEGRLRLTAEHIDALLQ 96



 Score = 28.5 bits (62), Expect = 0.003
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 574 DPQLLGIFRSEAQGHLASLEVYLQSTGGHDTPVSDDLQ---RALHTLKGSAAMAGV 626
           D  LL +F  EA+     L   L +   + T  +D L+   RA H+LKG+A + GV
Sbjct: 8   DASLLELFSLEAEAQTQVLNAGLMALERNPTQ-ADQLEACMRAAHSLKGAARIVGV 62