Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  386 bits (991), Expect = e-111
 Identities = 212/408 (51%), Positives = 271/408 (66%), Gaps = 14/408 (3%)

Query: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           M+FA LGL E L+R ++   YT PTPVQ +AIPAVL GRDLM AAQTGTGKT GFALP+L
Sbjct: 1   MNFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVL 60

Query: 61  ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMN 120
           +RL   G     ++      R LVL PTRELA QVH++ + YA +LPL +  ++GGV +N
Sbjct: 61  QRLALEG-----EKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSIN 115

Query: 121 PQIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLAR 180
           PQ+  + +GVD+LVA PGRLLDL  Q  V    V+ LVLDEADRMLD+GF  +++ V A 
Sbjct: 116 PQMMRLRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAA 175

Query: 181 LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL 240
           LP KRQ LLFSATFS  I  LA   L++P  IEV+P N T   ++Q +  +    K  L 
Sbjct: 176 LPRKRQTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLF 235

Query: 241 AHLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSV 300
            HL+    W+QVLVF +T++G ++L E L  +G+ A  IHG++ Q  R +AL  FKA  V
Sbjct: 236 CHLLRKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREV 295

Query: 301 RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           +VLVATD+AARGLDID LP VVN +LP V EDYVHRIGRTGRAG  GEAISLV  DE +L
Sbjct: 296 QVLVATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQL 355

Query: 361 LKSIERVTKQRIADGDLMGF---------DASQVEAEKPEARERPQNN 399
           L +IE +T+Q +   +   F         DAS    +KP+  ++P+ N
Sbjct: 356 LAAIEVLTRQTLPRHEEPDFIPEHRVPMTDASGQVIKKPKKPKKPKEN 403