Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 476 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  418 bits (1074), Expect = e-121
 Identities = 233/461 (50%), Positives = 301/461 (65%), Gaps = 14/461 (3%)

Query: 3   FASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
           F+ LGL+E L++A+EA GYT PTP+Q+++IP +LQG D++  AQTGTGKT  FALP+L+R
Sbjct: 5   FSELGLAEPLLKALEAEGYTTPTPIQEQSIPHLLQGSDVLGLAQTGTGKTASFALPLLQR 64

Query: 63  LFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMNPQ 122
           L         +R  P+  R+LVLTPTRELA QV  SFK Y     L  A +FGGVGM PQ
Sbjct: 65  L-----DQFKKRAMPKSCRILVLTPTRELAVQVGQSFKTYGCHYRLRHALVFGGVGMVPQ 119

Query: 123 IQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLARLP 182
           I+ +A GVDVLVA PGRLLDL  QG + L  VE LVLDEADRMLDMGFI  ++K++A +P
Sbjct: 120 IKTMAGGVDVLVATPGRLLDLIEQGAIRLDSVEALVLDEADRMLDMGFIQPIRKIVALVP 179

Query: 183 AKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALLAH 242
            +RQ +LFSAT    I  LA+ +LH P R+EVTP ++TV++I+Q+V  +   HKR LL  
Sbjct: 180 KQRQTVLFSATMPDSIVGLANSVLHTPVRVEVTPVSSTVDKIDQKVLFVDREHKRTLLTD 239

Query: 243 LITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSVRV 302
           ++      + LVFTRTKHGANR+ E LEK G+ A AIHGNKSQ AR KALADF+   ++ 
Sbjct: 240 ILAGKDVGRALVFTRTKHGANRVVELLEKAGIDADAIHGNKSQGARQKALADFRDGRIKA 299

Query: 303 LVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKLLK 362
           LVATDIAARG+D+D + HV+NFELPN  E YVHRIGRT RAG SG A+SL   DE   L+
Sbjct: 300 LVATDIAARGIDVDGITHVINFELPNEPESYVHRIGRTARAGASGIALSLCDGDEVAYLR 359

Query: 363 SIERVTKQRIADGDLMGFDASQVEAE----KPEARERPQNNGRGGRN--QQARGEGGKDT 416
            IE+  +Q I       + A+ +        P A + PQ +  GG+   QQ+RG      
Sbjct: 360 DIEKTIRQAIPVDYEQPYHAAHIATRGLPGGPRATKPPQPHRGGGKGHPQQSRGGNPHGE 419

Query: 417 NGGRKDKGKDKGK---ARQQAAAKPDDKEKSGDKQQPRKPR 454
           +G    KG+D  K   A + A+ +P    K   K    +P+
Sbjct: 420 HGAHPAKGRDGAKHTHAGKPASGRPAAAGKPAGKPGGARPQ 460