Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  324 bits (831), Expect = 6e-93
 Identities = 199/529 (37%), Positives = 287/529 (54%), Gaps = 39/529 (7%)

Query: 2   SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
           +F  LGL   +++A+  +GYT PTP+Q +AIP VL GRD++  AQTGTGKT  F LP++E
Sbjct: 19  TFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIE 78

Query: 62  RLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMNP 121
            +  AG      R   R PR L+L PTRELAAQV ++F  Y +  PL  A I GG  M+ 
Sbjct: 79  -ILAAG------RAKARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSD 131

Query: 122 QIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLARL 181
           Q+  + +GVDVL+A PGRLLD+  +G++ L  V++LV+DEADRMLDMGFI DV+K++  L
Sbjct: 132 QVALLDRGVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLL 191

Query: 182 PAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALLA 241
           P  RQ L FSAT   +I  LAD  L NP+ ++V+   +    + Q +  +    KR  L 
Sbjct: 192 PKIRQTLFFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLR 251

Query: 242 HLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSVR 301
           HLI +   +   +F   K   + L   L+K G     +HG+ +Q+AR + L  FK    R
Sbjct: 252 HLIRIEEVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEAR 311

Query: 302 VLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKLL 361
           ++V +D+AARG+DI  + HV NF++P   EDYVHRIGRTGRAG  G A ++ +PD+ + +
Sbjct: 312 LMVCSDVAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFV 371

Query: 362 KSIERVTKQRIADGDLMGFDASQVEAEKPEARERPQNNGRGGRNQQARGEGGKDTNGGRK 421
            +IE +    I    + G  A  +        +     GRGGR             G  K
Sbjct: 372 GAIEAMIGTTIPRISVEGVPALDL--------DMTARKGRGGR-------------GAPK 410

Query: 422 DKGKDKGKARQQAAAKPDDKEKSGDKQQPRK---PRDKKSRPQQASNNSVPKPPADRDPE 478
           D       A++ A  K DD+ K   +++PR+   P  + +  + A+   V + P +  PE
Sbjct: 411 D-------AKRPARGK-DDEAKPRRERRPRRDEAPVAEAAPVEAAAPEEVIERPREERPE 462

Query: 479 EFLDDELDNFGNRADYVSPYQGKNQGRNRRPGGAGQGQGQGNGQRSNAG 527
                  D    R D     + +  GRNR  G   +  G+  G+    G
Sbjct: 463 RSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRDERGGRRRGRIDELG 511