Pairwise Alignments

Query, 277 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 275 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score =  149 bits (376), Expect = 6e-41
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 9/273 (3%)

Query: 6   LVLVAALLHATWNTLIKFSGERLLVIASMDTVALAFAVLAVP---FVDVPPAEIWPWLVA 62
           LVL AALLHA+WN L++   +RL    SM  + L+ A++++    ++  P A  WP+   
Sbjct: 8   LVLFAALLHASWNALLRVGADRLW---SMTVMCLSVALVSIGVALYLPAPAAASWPYAAL 64

Query: 63  SALAEQLYRYLLIKAYRVGDLGLVYPLMRGLSPLVVLGLTLAFAGESLSQQQIIGILLIP 122
           S +    Y   L+++Y+VGDLG  YP+ RG SP+++    LAFAGE+LS   + GI L+ 
Sbjct: 65  SGVLHVGYNLFLVRSYKVGDLGQTYPIARGSSPILITLFALAFAGETLSTSALFGIALVS 124

Query: 123 CGMACLLWQGGGGDRLPWSMLPVVALIGLCIGCYTWFDGQAVRLWGKPWDYLVWLTLLSA 182
            G+  L ++     RL    LP     G  I  Y+  DG   RL G P  Y  W+  L  
Sbjct: 125 GGIISLAFR---QRRLAVPSLPYALGTGFFIAAYSVTDGVGARLSGAPMAYTAWMCALWG 181

Query: 183 WQFPLLASVARRAPFVLFWRTQWRLGLAVGFCVLFSYALVLWAMHLGSVAEAAALRELSV 242
              PL+    R A  +   R      L  G   L +Y +V++AM    +   +ALRE SV
Sbjct: 182 VLMPLVYMGLRGARSLFAPRPGLIPALMGGLVSLLAYGIVIYAMSESPMGSVSALRETSV 241

Query: 243 ILVVLLGMRYLKEPFGGPRLLACGLVLAGMLVM 275
           +   L+G  +L E     ++LAC ++ AG +++
Sbjct: 242 LFAALIGYFFLGEALTVRKVLACAVIAAGTMLI 274