Pairwise Alignments

Query, 277 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 293 a.a., Integral membrane protein from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 23/293 (7%)

Query: 3   ATSLVLVAALLHATWNTLIK-FSGERLLVIASMDTVALAFAVLAVPFV-DVPP---AEIW 57
           A +L+L+A ++HA WN + K  +G+      +     L +A + +    +V P   A  W
Sbjct: 5   AFALILLAGIIHAGWNIVAKKANGDARFSFQTSVFNMLIWAPVGITLGWNVVPGWGAAEW 64

Query: 58  PWLVASALAEQLYRYLLIKAYRVGDLGLVYPLMRGLSPLVVLGLTLAFAGESLSQQQIIG 117
            ++V S +    Y  +L++ YR  DL +VYPL RG  PL+   + + F GE +S   + G
Sbjct: 65  GFVVLSGVLHVFYFIVLLRGYRRSDLTVVYPLARGSGPLLSSLVAVLFLGEKISLFGVAG 124

Query: 118 ILLIPCGMACLLWQGGGGDRLPWSMLPVVA-------------LIGLCIGCYTWFDGQAV 164
           I  +  G+  +     GG +L W      A             L G  I  YT  D  AV
Sbjct: 125 IAGVVLGVFLV----AGGPKL-WRKSHDAAQRERVHKGIRYGVLTGGFIAAYTVVDSYAV 179

Query: 165 RLWGKPWDYLVWLTLLSAWQFPLLASVARRAPFVLFWRTQWRLGLAVGFCVLFSYALVLW 224
           +        L +   L      L  ++  RA     WR+QW+    V      SY LVL+
Sbjct: 180 KFLVMSPILLDYFGNLVRIVLLLPVALKDRATTARMWRSQWKYAALVAAVSPVSYVLVLY 239

Query: 225 AMHLGSVAEAAALRELSVILVVLLGMRYLKEPFGGPRLLACGLVLAGMLVMKL 277
           A+    ++  A  RE+S++   L+G   L+E     RLL    + AG++ + L
Sbjct: 240 AVQQAPISHVAPAREVSMLFAALIGGHLLREGDRLLRLLGAVFIAAGVVALAL 292