Pairwise Alignments

Query, 566 a.a., DNA ligase B from Pseudomonas putida KT2440

Subject, 712 a.a., DNA ligase from Xanthobacter sp. DMC5

 Score =  144 bits (363), Expect = 1e-38
 Identities = 156/628 (24%), Positives = 261/628 (41%), Gaps = 106/628 (16%)

Query: 19  RAASCPHWNPQQAKAEVAQLRATLARWDEHYHRQGIALVADELYDQSHERLNHLQQCFA- 77
           R+ +    +P  A AE A L   +   D  Y+R+   +V+D  YD    R   ++  F  
Sbjct: 9   RSLTVEDLSPSDAAAEHAALAEEIKGHDAAYYREDAPVVSDAEYDALRRRYEAIEARFPG 68

Query: 78  ----------VGTSPSPLASARGPVPHPVPHTGVDKLADRQAVARWMT-----------G 116
                     VG +PS      G V H VP   +  +    A+  ++             
Sbjct: 69  LVGEDSLSAKVGAAPS---EKFGKVVHGVPMLSLSSVFTDDAIFEFVARVKRFLSVNSDD 125

Query: 117 KTGVWVQPKVDGVAVSLTYQQGRLVQLTSRGDGVHGHDWSRHIPQLGAVTRQL-----PE 171
           +     +PK+DG++ SL Y+ GRL    +RGDG  G D + ++  +  V +QL     PE
Sbjct: 126 QIAFTCEPKIDGLSCSLRYENGRLTVAATRGDGRQGEDVTENVRTIDDVPQQLFTNDVPE 185

Query: 172 AVDLHLQGELYL-RLD-EHVQAKAGS------ANARGTVAGLLARKQLTGAQGNAIGLFV 223
            +D+  +GE+Y+ + D E + A+  +      AN R   AG L +   +      +  F 
Sbjct: 186 LIDV--RGEVYMAKADFEALNARQSALGERVFANPRNAAAGSLRQLDPSVTASRPLKFFA 243

Query: 224 WGWPHGPEQQAER----LAQLARLGFPDSQLYSIAIDTLEDAAHWRE-HWYRSALPFATD 278
           + W       A+     L    R GF  ++L ++A +  E   H+R+    R++LP+  D
Sbjct: 244 YAWGEASALPADTQNGMLNAFDRWGFCINRLVTVARNAGELIDHYRKIEELRASLPYDID 303

Query: 279 GVILRQGSRPPAER--WQAKAPYWIAAWKYPYAQALAEVRDVRFRVGRTGRVTPVLHVQP 336
           GV+ +       ER  + ++ P W  A K+P  QA   +  +  +VGRTG +TPV  + P
Sbjct: 304 GVVYKVNRLDLRERLGFVSRTPRWAIAHKFPAEQATTVLEAIDIQVGRTGALTPVAKLLP 363

Query: 337 VTLDDRRITQVSLGSLARWQRLDIRPGDQVAISLAGLTIPRLEHVVHRAVERQ------- 389
           VT+    +   +L +     R DIR GD V +  AG  IP++  V+    E++       
Sbjct: 364 VTVGGVVVANATLHNEDEIARKDIRVGDTVVVQRAGDVIPQVVRVI---TEKRPAGSKPY 420

Query: 390 --PITAPAPDQH----------HAHSCWQASEG--CDEQFIARLTWLGGKQGLALPRTGP 435
             P   PA   H             +  + + G  C  Q + RL     +    +   G 
Sbjct: 421 EFPTLCPACGSHAVREVDTKTGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGE 480

Query: 436 GTWRRLVEAGLVTSMTDWLQLDA------ERLQQAPGISRLTATQMLGSFDQARSRPFDQ 489
              R   + GL+ S  D   L+A      +RL+   G  + +A  +  +    R+   D+
Sbjct: 481 KQVRAFYDWGLIASPADIFTLEARNKEGLQRLENREGWGKTSAANLFVAIQSRRNVAVDR 540

Query: 490 WLRALGVPIGKHLPLTGNWQ--------------ALASRSAGQ--------WQ---TVPG 524
           ++ ALG+   +H+  T   +              ALA+   G+        WQ    + G
Sbjct: 541 FVFALGI---RHVGETNAKRLMRHYGTVEALEAGALAAAIPGEEHPKGNDAWQEMLAIDG 597

Query: 525 IGAKRSRQLVEFF-AASEVQAIAAQLAE 551
           +G   +  ++EFF      + +AA LAE
Sbjct: 598 VGDVVAEAVIEFFHEPRNREVVAALLAE 625