Pairwise Alignments

Query, 708 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 703 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  317 bits (813), Expect = 1e-90
 Identities = 197/558 (35%), Positives = 300/558 (53%), Gaps = 9/558 (1%)

Query: 147 RELETARAFNASILENAAEGILVVDAHGIIRFANPAISRLLAAPVQHLQGTQLLDVVQLT 206
           ++ E +    A++ E   E I+V D    I   N A  R+       + G Q  D++ + 
Sbjct: 138 KQAEESLRLAATVFETVGEAIVVTDRERRILAVNAAFERMTGWNAAEMVG-QTCDLLAVE 196

Query: 207 STSLWRESDFYKAYQGRQIYRVHDAQLRTQGGELVPVALSCAPLPADQQA------MVVT 260
              L    + ++       +   +   R +  E  P AL+   +     A       V+ 
Sbjct: 197 MIGLREIEEMWRLAANTGQWS-GETWTRRKESEPFPAALALTAVDQGADAKGEDGRFVLL 255

Query: 261 VLDMSAVRNLHQQLEYQAITDPLTGLLNRRGFYQAAEGALLRNERSDKAQALMYMDLDGF 320
           + D++  R   Q++ + A  D LT L NR    +A   A++R E++ +  A++Y+D++ F
Sbjct: 256 LRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLAVLYLDVNRF 315

Query: 321 KRINDSLGHDAGDRVLRWVAEQLKDCLGSEALLARMGGDEFTALFDSLPYPEQAGRFAER 380
           K INDS GH  GD +LR VA +LK C+ +  ++ R+GGDEF  L  S+     A   A +
Sbjct: 316 KDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLPSVGDHTAAQACANK 375

Query: 381 LLERVSISHEVDGLDVCLGVSIGIATYPDCGANVEGLLRSADAAMYAAKQAGRQQYRFYD 440
           +L   +   +++GL +  G SIGIA YPD     E LL  ADAAMY AK+ G   Y  +D
Sbjct: 376 VLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYHAKRGGLP-YSCFD 434

Query: 441 QELNGRARSRLMLEDSVRMAIEQQDFTLVYQPQVAFHDGRLRGFEALLRWQHPSVGDVPP 500
            E++ +   R+ LE+ +R+A+ +  F LVYQP+V    G + G EAL+RW+HP   DV P
Sbjct: 435 IEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAEALIRWRHPVRADVSP 494

Query: 501 GLFIPLLEEARLINRLASWIYRQGAAQRQAWYDRFPPDLVLGISLSRAQFVMPGLVEELQ 560
           GLFIP+ E A LI  +  W+  +   Q   W  +      + ++LS AQF    L E+++
Sbjct: 495 GLFIPVAERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNLSPAQFHDGRLKEKVK 554

Query: 561 RVIQLYQLVPTQLEVEVAETSLMYNIDAAVKQIHRLRELGVRVALDDFGAGDCSLRMLRD 620
             +    L P+ LE+E+ ET +  ++D A++ + +L  LGVRV+LDDFG G  SL  L+ 
Sbjct: 555 AALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSLDDFGTGYSSLAYLKL 614

Query: 621 LPIDTLKLDRHLVARLPDSTVDAALVRSVIGLCADYRITVIAEGVETPAQAAWLKANGCE 680
            P+ TLK+DR  V  LP +  D A++ SVI L  +   +VIAEGVET  QAA+L A GC 
Sbjct: 615 FPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGVETREQAAFLAARGCP 674

Query: 681 YVQGFLVAYPMTATDASG 698
            +QGFL + P+ A   +G
Sbjct: 675 IMQGFLFSRPVNAATFAG 692



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 158 SILENAAEGILVVDAHGIIRFANPAISRLLA--APVQHLQGTQLLDVVQLTSTSLWRESD 215
           S+ ENA EGI      G    ANPA++R+     P + + G  L D+ +           
Sbjct: 25  SLFENAVEGIYRTTPDGRYLDANPALARIYGYKDPAELIAG--LTDIARGLYVDPADRER 82

Query: 216 FYKAYQGRQIYRVHDAQLRTQGGELVPVALSCAPLPADQQAMVV---TVLDMSAVRNLHQ 272
           F +      + R  +A++RT+ GE++ +A +   +   +  +V    TV +++A +   +
Sbjct: 83  FREILARDSVVRNFEARVRTRSGEIIWIAENARAVYDGRDRLVCYEGTVQNITARKQAEE 142

Query: 273 QLEYQA 278
            L   A
Sbjct: 143 SLRLAA 148