Pairwise Alignments

Query, 461 a.a., ATP-dependent RNA helicase, specific for 23S rRNA from Pseudomonas putida KT2440

Subject, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  255 bits (651), Expect = 2e-72
 Identities = 149/368 (40%), Positives = 216/368 (58%), Gaps = 11/368 (2%)

Query: 8   FATLPLSTAMLANLEALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAFGIGLLNP 67
           FA L L   +L  L+ L Y + TP+QA+++P +L G+DL+A A+TG+GKTA F + +L  
Sbjct: 3   FAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQR 62

Query: 68  I-----NPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLC--GGVSLGPQIA 120
           +            +ALVL PTRELA+QV   +R  A   +N+ + T    GGVS+ PQ+ 
Sbjct: 63  LALEGEKVASNSIRALVLVPTRELAEQVHNNVREYA---ENLPLTTYAVYGGVSINPQMM 119

Query: 121 SLEHGAHIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIASIIGKTPSR 180
            L  G  ++V TPGR+     +  +  + + TLVLDEADRMLD+GF + + S+    P +
Sbjct: 120 RLRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRK 179

Query: 181 RQTLLFSATYPAGIKQLAADFMRNPQQVKVESLH-TDNQIEQRFIEIDPQQRLEAVTRVL 239
           RQTLLFSAT+   I+ LA   + +P  ++V   + T   ++Q  + +D +++ +    +L
Sbjct: 180 RQTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCHLL 239

Query: 240 GHYRPQSCVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLV 299
              R +  + F  T+   + +V  L A+G+ A  +HGD  Q  R + L  F  R   VLV
Sbjct: 240 RKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLV 299

Query: 300 ATDVAARGLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGVAVSLVAPAEGHRAQAI 359
           ATDVAARGLDID L +V+N++L   AE +VHR+GRTGRAG KG A+SLV   E     AI
Sbjct: 300 ATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAI 359

Query: 360 EALQNSPL 367
           E L    L
Sbjct: 360 EVLTRQTL 367