Pairwise Alignments

Query, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 596 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

 Score =  368 bits (945), Expect = e-106
 Identities = 221/593 (37%), Positives = 321/593 (54%), Gaps = 6/593 (1%)

Query: 9   RNLAFELYEVLDAEALTLRPRFAEHSRETFDAALTTARTIAEKYFAPHNRKADENEPRYV 68
           R++ F L E+   +     P  +E + +  DA L  A         P NR  DE      
Sbjct: 9   RDMRFVLNELHADDGFGDIPALSEFTPDLTDAILEEAARFCRDVLLPINRSGDEEGCHLE 68

Query: 69  DGRAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTAYPF 128
           +G          A   F E G+     D E GG  LP  V++       ++N     YP 
Sbjct: 69  NGVVRTPAGFPEAYKQFAEGGWTALASDPEWGGQGLPEAVNKLVEEMICSSNLSFGLYPG 128

Query: 129 LTMGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGDGSY 188
           LT GA   IE  GSD  K+ +L  M+ G++ GTM LTEPH G+ L  +R+RA P GDGSY
Sbjct: 129 LTHGATTAIEGHGSDALKQAYLPKMVSGQWSGTMCLTEPHCGTDLGLLRSRAVPQGDGSY 188

Query: 189 RLKGNKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPNGSRGPRNDV 248
           ++ G+KIFIS G+H+L+ENI+H+VLA+LPDAP GVKGISLF+VPKY    +G+ G  N V
Sbjct: 189 KVTGSKIFISAGEHDLTENIIHLVLARLPDAPKGVKGISLFLVPKYLPREDGTPGQSNGV 248

Query: 249 LLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVML 308
             A + HKMG + + +  +NF D+   +G++VG+P +G+A MF MMN  R+ VG+  + +
Sbjct: 249 ACAAIEHKMGLKASATCQMNFDDS---IGWIVGEPGKGMAAMFTMMNTERVSVGIQGLGV 305

Query: 309 GYAGYLYSLEYARQRPQGR-LPDNKDPHSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLY 367
           G A Y  +  YA+ R QGR L   K P   A PII H DV+RML+  +AY EG   L  +
Sbjct: 306 GEAAYQAAAWYAKDRIQGRALSGPKYPDQAADPIIVHPDVRRMLMTMRAYNEGCRALSAW 365

Query: 368 AARLFDDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYP 427
            +R  D    +P+   R+ A D + L+TP+VK+  +     +  LA+Q  GGHGY RE  
Sbjct: 366 VSRALDAEKHSPEPEVRQRASDFIALMTPVVKALFTDLAFDSANLAVQCYGGHGYIRESG 425

Query: 428 VEQYYRDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCERASHHPNLDP 487
           VEQY RD R+  I+EGT G+Q+LDL+GRKL  H G  L+     ++A  E  +    + P
Sbjct: 426 VEQYARDARITMIYEGTNGVQALDLVGRKLGAHMGRYLRSFFHPVSAFIEENNVDGPMKP 485

Query: 488 LRQPLEQLANRLQGVTLALLGDLAQGKVAGALANSALYLKAFGHCVIGWRWLEQAVHAEL 547
           + + L +    LQ ++ A +   A      A A SA YL+  G   +G+ + +    A L
Sbjct: 486 MIEALAKAFGALQ-LSTATVAQRALKDPEEAGAASADYLRLMGLVAMGYCFAKATKIAGL 544

Query: 548 GMLKGTAADRDFYLGKLQAARYFLTWEVPGCHNELALLEAHDDTCLGMQDGWF 600
            +  G + D+ FY  K++ A +F    +P        ++A   + + ++D  F
Sbjct: 545 QLFFG-SEDKRFYDAKIKTATFFFERILPQATASFLAIKAGKKSLMALEDDVF 596