Pairwise Alignments

Query, 542 a.a., sodium/L-proline transporter from Pseudomonas putida KT2440

Subject, 460 a.a., sodium:solute symporter from Pseudomonas simiae WCS417

 Score =  116 bits (290), Expect = 2e-30
 Identities = 117/464 (25%), Positives = 207/464 (44%), Gaps = 36/464 (7%)

Query: 60  VIYIAAMVLIGFAAYRATNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIYFA 119
           +IY A M+++G+   R      DY++ GR+LG  +   +  A+ + G   +G     Y  
Sbjct: 9   LIYAAGMLVLGYYGMRRAKTHEDYLVAGRNLGPSLYMGTMAATVLGGASTVGTVRLGYVH 68

Query: 120 GLSEAWIAIGLTVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDNSGLLRIISAI 179
           G+S  W+   L  G     LF+A  L           T+      R+   + + R  SA+
Sbjct: 69  GISGFWLCAALGAGIIALNLFLAKPLL-----KLKIFTVTQVLEKRY---NPMARQASAV 120

Query: 180 VILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSWTDTVQA 239
           ++L +  +   + I+A   + +  FG+ +  ++  G    + Y+ +GG  +++ TD VQ 
Sbjct: 121 IMLAYALMIGVTSILAIGTVLQVLFGLPFWISVLLGGGVVVVYSTIGGMWSLTLTDIVQF 180

Query: 240 SLMIFAL--ILTPVIVLISTGGFDQTFAAIEAVNPANFDMLKGATFIGIISLMGWGLGYF 297
            +    L  IL P I L   GG+D+  A + A +  +F  +   T I    +  +G+   
Sbjct: 181 VIKTVGLMFILLP-ICLYRVGGWDELVAKLPA-SSFSFTAIGWDTIITYFMIYFFGI-LI 237

Query: 298 GQPHILARFMAADSVKSIAKARRISMTWM-ILCLAGTCAVGFFGIAYFSAHPELAGPVSE 356
           GQ      F A D      K  + + T+    C+    A    G+A     P+L     +
Sbjct: 238 GQDIWQRVFTARDE-----KVAKYAGTFAGFYCILYGLACALIGMAAHVLIPDL-----D 287

Query: 357 NHERVFIELAKILFNPWVAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKAFLRKNASQ 416
           N    F  + K+     + G++++A LAA+MST S  LL  S+ LTED      R    +
Sbjct: 288 NVNNAFAAIVKMSLPDGIRGLVIAAALAAMMSTASAGLLAASTVLTEDLLP---RLRGGK 344

Query: 417 VELVWVGRLMVL--AVALIAIAMAANPENRVLGLVAYAWAGFGAAFGPVVLISVLWKGMT 474
              + V RL  L   +A++ IA+  N    V+  +  A+          ++ ++ WK  T
Sbjct: 345 QSSLGVNRLFTLLTGIAVLGIALVVND---VISALTLAYNLLVGGMLIPLIGAIFWKRAT 401

Query: 475 RNGALAGIVVGALTVILWKNFDTLGLYEIIPGFLFASIAIVLVS 518
            +GA+  + +G +T +++   D  GL    P  ++ S+A+ LVS
Sbjct: 402 TSGAITSMTLGFVTALVFMIKD--GLDANTP--IYYSLAVGLVS 441