Pairwise Alignments

Query, 542 a.a., sodium/L-proline transporter from Pseudomonas putida KT2440

Subject, 624 a.a., L-arabinose symporter (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  103 bits (256), Expect = 3e-26
 Identities = 123/513 (23%), Positives = 217/513 (42%), Gaps = 73/513 (14%)

Query: 57  ITFVIYIAAMVLIGFAAYRATNNLS----DYILGGRSLGSVVTALSAGASDMSGWLLMGL 112
           + F++Y  A+V +G    R    L     +Y L  +SL    T  + GAS     LL   
Sbjct: 11  VIFIVYALAIVSVGLWVSRTKKGLEKTAQEYFLADKSL----TWWAVGAS-----LLAAN 61

Query: 113 PGAIYFAGLSEAWIAIGLTVGAYLNW-----LFVAGRLRVQTEHNGDALTLPDYFSSRFE 167
             A +F G S +  AIGL + AY  W     L +  +  +         T+P + S RF 
Sbjct: 62  ISAEHFIGTSGSGFAIGLGISAY-EWIAAIALIIVAKYFLPIFLKHGVYTMPQFLSERF- 119

Query: 168 DNSGLLRIISAIVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGG 227
            N G+    +   +LV+  +   S    GA   +   G+  +  +      +  Y+  GG
Sbjct: 120 -NKGVSTAFAVFWLLVYVFVNLTSVSYLGALALDKIMGIPLQYGIIGLLIFSGIYSIYGG 178

Query: 228 FLAVSWTDTVQASLMIFALILTPVIVLISTGGFDQTFAAIEAV-NPA--NFDML--KGAT 282
             AV+WTD VQ  +++   ++T  + L + G  D  FA +  + N A  +F M+  +G  
Sbjct: 179 LEAVAWTDVVQVIILVAGGLITTFLALDAVGMGDGIFAGMSNLYNDAKDHFVMIMPQGRV 238

Query: 283 FI---------------GIISLMG--W--GLGYFG-QPHILARFMAADSVKSIAKARRIS 322
            +               G+  ++G  W   LGY+G   +I+ + +AA S++   K    +
Sbjct: 239 MVPDGLGGSRDAFQDLPGLAVILGGMWLTNLGYWGFNQYIIQKGLAAKSIEEAKKGLLFA 298

Query: 323 -----MTWMILCLAGTCAVGFFG-------IAYFSAHPELAGPVSENHERVFIELAKILF 370
                +  +I+ + G  A             A  +   E  G + ++ E     L   + 
Sbjct: 299 GYLKLLMPIIVVIPGIAAYVLINDYSPEQLAAILNMPVEHIGTIQKSDEAYPWLLRNFIP 358

Query: 371 NPWVAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKAFLRKNASQVELVWVGRLMVLAV 430
           N  + G+  +A+ AA++S+L+  +   S+  T D YK + + NA+  +LV  GR  ++AV
Sbjct: 359 NG-IRGLAFAALAAAIVSSLASMINSTSTIFTMDIYKVYFKPNANNHQLVRTGR--IVAV 415

Query: 431 ALIAIAMAANPENRVLGLV--------AYAWAGFGAAFGPVVLISVLWKGMTRNGALAGI 482
             +AIAM   P+   L  V         Y + G    FG    + ++W+  T + AL   
Sbjct: 416 VALAIAMIVAPQLASLDQVFQYIQEYTGYIYPGVVVVFG----MGLIWRQATASAALWTA 471

Query: 483 VVGALTVILWKNFDTLGLYEIIPGFLFASIAIV 515
           +      I++K F     + +  G++F  +  +
Sbjct: 472 IATIPAGIVFKIFYPEMPFLLRMGYVFIILCFI 504