Pairwise Alignments

Query, 278 a.a., 23S rRNA m(6)A2030 methyltransferase from Pseudomonas putida KT2440

Subject, 304 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Rhodanobacter sp000427505 FW510-R12

 Score =  234 bits (598), Expect = 1e-66
 Identities = 128/283 (45%), Positives = 174/283 (61%), Gaps = 7/283 (2%)

Query: 1   MNYRHAFHAGNHADVLKHIVLTRLIALMSRKEQPFAYIDTHAGLGLYDLQGDQASRTGEY 60
           MNYRHA+HAGN ADVLKH+VL  L+  +  K  PF Y+DTHAG G Y L+G +A +TGEY
Sbjct: 1   MNYRHAYHAGNFADVLKHVVLLALVEALQAKSTPFCYVDTHAGSGSYALEGHEAKKTGEY 60

Query: 61  LEGVARLWNRDDLPAMADDYLRIIKRLNADGE---LRYYPGSPELARRLMRQQDRALLNE 117
            +G+ARL   + LP +   +   I  L  +G    L+YYPGSP    R +R  D A L E
Sbjct: 61  HDGIARLHPAEKLPPLLRRWRDGI--LGGEGNEHGLKYYPGSPLQVARALRPGDSAQLCE 118

Query: 118 KHPEDGPLLKENMKKDPRVTVHLGEGWHVPRALLPVQEKRAIMLIDPPFE-QADELKRCT 176
            H E+   L+E  + +P+V VH  +G+   +ALLP +EKR ++LIDPP+E Q  E K   
Sbjct: 119 LHAEEAAKLRELFRGNPQVHVHQRDGYEALKALLPPKEKRGLVLIDPPYEAQEAEYKLIE 178

Query: 177 TAMKEAIGRMRQTVAAIWYPIKDQRSLTRYYQDLTSTGAPKLLRVELYVHHQDSPQGLNG 236
            A+K A+ R    V A+WYPIK +  +  + + L  +G  ++LR EL VH  DSP  LNG
Sbjct: 179 QALKTALPRWPTGVYAVWYPIKLRSQVQPFLRKLQHSGVKRILRAELLVHPDDSPLRLNG 238

Query: 237 SGLAIANPPWGLEDELKELLPWLAKELAQ-TAGSYRMDWLIAE 278
           SG+ I N PW L+D L+E L  LA  L+Q     +++DWL+ E
Sbjct: 239 SGMVILNAPWKLDDTLREPLRMLASLLSQERPAEWKLDWLLDE 281